Simulation-Based Evaluation of Hybridization Network Reconstruction Methods in the Presence of Incomplete Lineage Sorting
出版年份 2017 全文链接
标题
Simulation-Based Evaluation of Hybridization Network Reconstruction Methods in the Presence of Incomplete Lineage Sorting
作者
关键词
-
出版物
Evolutionary Bioinformatics
Volume 13, Issue -, Pages 117693431769193
出版商
SAGE Publications
发表日期
2017-03-10
DOI
10.1177/1176934317691935
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A scalability study of phylogenetic network inference methods using empirical datasets and simulations involving a single reticulation
- (2016) Hussein A. Hejase et al. BMC BIOINFORMATICS
- Inferring Phylogenetic Networks with Maximum Pseudolikelihood under Incomplete Lineage Sorting
- (2016) Claudia Solís-Lemus et al. PLoS Genetics
- A maximum pseudo-likelihood approach for phylogenetic networks
- (2015) Yun Yu et al. BMC GENOMICS
- Inferring the mode of origin of polyploid species from next-generation sequence data
- (2015) Camille Roux et al. MOLECULAR ECOLOGY
- Bears in a Forest of Gene Trees: Phylogenetic Inference Is Complicated by Incomplete Lineage Sorting and Gene Flow
- (2014) Verena E. Kutschera et al. MOLECULAR BIOLOGY AND EVOLUTION
- Maximum likelihood inference of reticulate evolutionary histories
- (2014) Yun Yu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Whole-genome analyses resolve early branches in the tree of life of modern birds
- (2014) E. D. Jarvis et al. SCIENCE
- The Effective Population Sizes of the Anthropoid Ancestors of the Human-Chimpanzee Lineage Provide Insights on the Historical Biogeography of the Great Apes
- (2013) C. G. Schrago MOLECULAR BIOLOGY AND EVOLUTION
- A Versatile and Highly Efficient Toolkit Including 102 Nuclear Markers for Vertebrate Phylogenomics, Tested by Resolving the Higher Level Relationships of the Caudata
- (2013) Xing Xing Shen et al. MOLECULAR BIOLOGY AND EVOLUTION
- Parsimonious Inference of Hybridization in the Presence of Incomplete Lineage Sorting
- (2013) Yun Yu et al. SYSTEMATIC BIOLOGY
- Statistical Inference of Allopolyploid Species Networks in the Presence of Incomplete Lineage Sorting
- (2013) Graham Jones et al. SYSTEMATIC BIOLOGY
- Robustness to Divergence Time Underestimation When Inferring Species Trees from Estimated Gene Trees
- (2013) Michael DeGiorgio et al. SYSTEMATIC BIOLOGY
- Computational approaches to species phylogeny inference and gene tree reconciliation
- (2013) Luay Nakhleh TRENDS IN ECOLOGY & EVOLUTION
- Origin of land plants using the multispecies coalescent model
- (2013) Bojian Zhong et al. TRENDS IN PLANT SCIENCE
- Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
- (2012) S. Song et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
- (2012) Daniel H. Huson et al. SYSTEMATIC BIOLOGY
- The Probability of a Gene Tree Topology within a Phylogenetic Network with Applications to Hybridization Detection
- (2012) Yun Yu et al. PLoS Genetics
- Phylogenetic networks do not need to be complex: using fewer reticulations to represent conflicting clusters
- (2010) Leo van Iersel et al. BIOINFORMATICS
- The Accuracy of Species Tree Estimation under Simulation: A Comparison of Methods
- (2010) Adam D. Leaché et al. SYSTEMATIC BIOLOGY
- A Statistical Approach for Distinguishing Hybridization and Incomplete Lineage Sorting
- (2009) Simon Joly et al. AMERICAN NATURALIST
- Computing galled networks from real data
- (2009) D. H. Huson et al. BIOINFORMATICS
- Inferring polyploid phylogenies from multiply-labeled gene trees
- (2009) Martin Lott et al. BMC EVOLUTIONARY BIOLOGY
- Identifying Hybridization Events in the Presence of Coalescence via Model Selection
- (2009) Laura Salter Kubatko SYSTEMATIC BIOLOGY
- Properties of Consensus Methods for Inferring Species Trees from Gene Trees
- (2009) James H. Degnan et al. SYSTEMATIC BIOLOGY
- Species Tree Inference by Minimizing Deep Coalescences
- (2009) Cuong Than et al. PLoS Computational Biology
- PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships
- (2008) Cuong Than et al. BMC BIOINFORMATICS
- Using supernetworks to distinguish hybridization from lineage-sorting
- (2008) Barbara R Holland et al. BMC EVOLUTIONARY BIOLOGY
- Modular networks and cumulative impact of lateral transfer in prokaryote genome evolution
- (2008) T. Dagan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Detecting hybrid speciation in the presence of incomplete lineage sorting using gene tree incongruence: A model
- (2008) Chen Meng et al. THEORETICAL POPULATION BIOLOGY
- Analysis of 142 genes resolves the rapid diversification of the rice genus
- (2008) Xin-Hui Zou et al. GENOME BIOLOGY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search