Glycerol stress in S accharomyces cerevisiae : Cellular responses and evolved adaptations

Comparison of normalization and differential expression analyses using RNA-Seq data from 726 individual Drosophila melanogaster

(2016) Yanzhu Lin et al.   BMC GENOMICS

Molecular Insights into the Enigmatic Metabolic Regulator, SnRK1

(2016) Shane Emanuelle et al.   TRENDS IN PLANT SCIENCE

An integrated view on a eukaryotic osmoregulation system

(2015) Stefan Hohmann   CURRENT GENETICS

Responses to phosphate deprivation in yeast cells

(2015) Kamlesh Kumar Yadav et al.   CURRENT GENETICS

Concomitant osmotic and chaotropicity-induced stresses in Aspergillus wentii: compatible solutes determine the biotic window

(2015) Flávia de Lima Alves et al.   CURRENT GENETICS

Chaotropicity: a key factor in product tolerance of biofuel-producing microorganisms

(2015) Jonathan A Cray et al.   CURRENT OPINION IN BIOTECHNOLOGY

Microbial community of the deep-sea brine LakeKryosseawater-brine interface is active below the chaotropicity limit of life as revealed by recovery of mRNA

(2015) Michail M. Yakimov et al.   ENVIRONMENTAL MICROBIOLOGY

The yeast Hot1 transcription factor is critical for activating a single target gene, STL1

(2015) Chen Bai et al.   MOLECULAR BIOLOGY OF THE CELL

Two glycerol uptake systems contribute to the high osmotolerance ofZygosaccharomyces rouxii

(2015) Michala Dušková et al.   MOLECULAR MICROBIOLOGY

Determinants of the rate of protein sequence evolution

(2015) Jianzhi Zhang et al.   NATURE REVIEWS GENETICS

Water structure and chaotropicity: their uses, abuses and biological implications

(2015) Philip Ball et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

The origins of mutational robustness

(2015) Mario A. Fares   TRENDS IN GENETICS

Beyond the Whole-Genome Duplication: Phylogenetic Evidence for an Ancient Interspecies Hybridization in the Baker's Yeast Lineage

(2015) Marina Marcet-Houben et al.   PLOS BIOLOGY

Causal Drift, Robust Signaling, and Complex Disease

(2015) Andreas Wagner   PLoS One

Multiplication of microbes below 0.690 water activity: implications for terrestrial and extraterrestrial life

(2014) Andrew Stevenson et al.   ENVIRONMENTAL MICROBIOLOGY

Microbiology of sugar-rich environments: diversity, ecology and system constraints

(2014) Bart Lievens et al.   ENVIRONMENTAL MICROBIOLOGY

The Yeast Deletion Collection: A Decade of Functional Genomics

(2014) Guri Giaever et al.   GENETICS

Preservation of genetic and regulatory robustness in ancient gene duplicates ofSaccharomyces cerevisiae

(2014) Orla M. Keane et al.   GENOME RESEARCH

Is there a common water-activity limit for the three domains of life?

(2014) Andrew Stevenson et al.   ISME Journal

A Comparative Study of Techniques for Differential Expression Analysis on RNA-Seq Data

(2014) Zong Hong Zhang et al.   PLoS One

Transcriptional regulation of the stress response by mTOR

(2014) J. Aramburu et al.   Science Signaling

Genetic Influences on Translation in Yeast

(2014) Frank W. Albert et al.   PLoS Genetics

Mechanisms of regulation of SNF1/AMPK/SnRK1 protein kinases

(2014) Pierre Crozet et al.   Frontiers in Plant Science

Growth Rates Made Easy

(2013) B. G. Hall et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Roles of Whole-Genome and Small-Scale Duplications in the Functional Specialization of Saccharomyces cerevisiae Genes

(2013) Mario A. Fares et al.   PLoS Genetics

The biology of habitat dominance; can microbes behave as weeds?

(2013) Jonathan A. Cray et al.   Microbial Biotechnology

A universal measure of chaotropicity and kosmotropicity

(2012) Jonathan A. Cray et al.   ENVIRONMENTAL MICROBIOLOGY

Nutritional Control of Growth and Development in Yeast

(2012) J. R. Broach   GENETICS

Level of Gene Expression Is a Major Determinant of Protein Evolution in the Viral Order Mononegavirales

(2012) I. Pagan et al.   JOURNAL OF VIROLOGY

Evolutionary Dynamics and Functional Specialization of Plant Paralogs Formed by Whole and Small-Scale Genome Duplications

(2012) Lorenzo Carretero-Paulet et al.   MOLECULAR BIOLOGY AND EVOLUTION

A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae

(2012) Intawat Nookaew et al.   NUCLEIC ACIDS RESEARCH

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics

(2012) M. Lohse et al.   NUCLEIC ACIDS RESEARCH

Gpd1 and Gpd2 Fine-Tuning for Sustainable Reduction of Glycerol Formation in Saccharomyces cerevisiae

(2011) Georg Hubmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Impulse Control: Temporal Dynamics in Gene Transcription

(2011) Nir Yosef et al.   CELL

The AMPK/SNF1/SnRK1 fuel gauge and energy regulator: structure, function and regulation

(2011) Ruben Ghillebert et al.   FEBS Journal

XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast

(2011) E. L. van Dijk et al.   NATURE

REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms

(2011) Fran Supek et al.   PLoS One

Saccharomyces cerevisiae glycerol/H+ symporter Stl1p is essential for cold/near-freeze and freeze stress adaptation. A simple recipe with high biotechnological potential is given

(2010) Joana Tulha et al.   Microbial Cell Factories

Transcriptional plasticity through differential assembly of a multiprotein activation complex

(2010) Laëtitia Cormier et al.   NUCLEIC ACIDS RESEARCH

The importance and ecology of yeasts in soil

(2010) Alfred Botha   SOIL BIOLOGY & BIOCHEMISTRY

Hydrophobic substances induce water stress in microbial cells

(2010) Prashanth Bhaganna et al.   Microbial Biotechnology

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Limits of life in hostile environments: no barriers to biosphere function?

(2009) Jim P. Williams et al.   ENVIRONMENTAL MICROBIOLOGY

Transcriptional regulation of nonfermentable carbon utilization in budding yeast

(2009) Bernard Turcotte et al.   FEMS YEAST RESEARCH

Mistranslation-Induced Protein Misfolding as a Dominant Constraint on Coding-Sequence Evolution

(2008) D. Allan Drummond et al.   CELL

Yeast selection for fuel ethanol production in Brazil

(2008) Luiz C. Basso et al.   FEMS YEAST RESEARCH

The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing

(2008) U. Nagalakshmi et al.   SCIENCE

Coordination of Growth Rate, Cell Cycle, Stress Response, and Metabolic Activity in Yeast

(2007) Matthew J. Brauer et al.   MOLECULAR BIOLOGY OF THE CELL