Global microbialization of coral reefs

Local genomic adaptation of coral reef-associated microbiomes to gradients of natural variability and anthropogenic stressors

(2014) L. W. Kelly et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Localized refractory dissolved organic carbon sinks in the deep ocean

(2013) Dennis A. Hansell et al.   GLOBAL BIOGEOCHEMICAL CYCLES

Coral and macroalgal exudates vary in neutral sugar composition and differentially enrich reef bacterioplankton lineages

(2013) Craig E Nelson et al.   ISME Journal

The cost of efficiency in energy metabolism

(2013) A. I. Stettner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Glycolytic strategy as a tradeoff between energy yield and protein cost

(2013) A. Flamholz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Surviving in a Marine Desert: The Sponge Loop Retains Resources Within Coral Reefs

(2013) Jasper M. de Goeij et al.   SCIENCE

Influence of coral and algal exudates on microbially mediated reef metabolism

(2013) Andreas F. Haas et al.   PeerJ

Assessing Coral Reefs on a Pacific-Wide Scale Using the Microbialization Score

(2012) Tracey McDole et al.   PLoS One

Diel Variability in Seawater pH Relates to Calcification and Benthic Community Structure on Coral Reefs

(2012) Nichole N. Price et al.   PLoS One

Unseen players shape benthic competition on coral reefs

(2012) Katie L. Barott et al.   TRENDS IN MICROBIOLOGY

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

(2012) Sahar Abubucker et al.   PLoS Computational Biology

Quality control and preprocessing of metagenomic datasets

(2011) R. Schmieder et al.   BIOINFORMATICS

Allelochemicals produced by Caribbean macroalgae and cyanobacteria have species-specific effects on reef coral microorganisms

(2011) K. M. Morrow et al.   CORAL REEFS

Black reefs: iron-induced phase shifts on coral reefs

(2011) Linda Wegley Kelly et al.   ISME Journal

Depleted dissolved organic carbon and distinct bacterial communities in the water column of a rapid-flushing coral reef ecosystem

(2011) Craig E Nelson et al.   ISME Journal

Dissolved Organic Matter in the Ocean: A Controversy Stimulates New Insights

(2011) Dennis Hansell et al.   OCEANOGRAPHY

Effects of Coral Reef Benthic Primary Producers on Dissolved Organic Carbon and Microbial Activity

(2011) Andreas F. Haas et al.   PLoS One

Composition analysis of organic matter released by cosmopolitan coral reef-associated green algae

(2010) AS Haas et al.   Aquatic Biology

Will ocean acidification affect marine microbes?

(2010) Ian Joint et al.   ISME Journal

Organic matter release by the dominant primary producers in a Caribbean reef lagoon: implication for in situ O2 availability

(2010) AF Haas et al.   MARINE ECOLOGY PROGRESS SERIES

Organic matter release by Red Sea coral reef organisms—potential effects on microbial activity and in situ O2 availability

(2010) C Wild et al.   MARINE ECOLOGY PROGRESS SERIES

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Seafloor ecosystem functioning: the importance of organic matter priming

(2009) Paul van Nugteren et al.   MARINE BIOLOGY

The genomic basis of trophic strategy in marine bacteria

(2009) F. M. Lauro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Counterintuitive carbon-to-nutrient coupling in an Arctic pelagic ecosystem

(2008) T. F. Thingstad et al.   NATURE

Microbial Ecology of Four Coral Atolls in the Northern Line Islands

(2008) Elizabeth A. Dinsdale et al.   PLoS One

Baselines and Degradation of Coral Reefs in the Northern Line Islands

(2008) Stuart A. Sandin et al.   PLoS One

Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa

(2008) R. L. Vega Thurber et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ocean acidification causes bleaching and productivity loss in coral reef builders

(2008) K. R. N. Anthony et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Global Map of Human Impact on Marine Ecosystems

(2008) Benjamin S. Halpern et al.   SCIENCE