Speciation driven by hybridization and chromosomal plasticity in a wild yeast

Temperature and host preferences drive the diversification of Saccharomyces and other yeasts: a survey and the discovery of eight new yeast species

(2015) Kayla Sylvester et al.   FEMS YEAST RESEARCH

Homoploid hybrid speciation and genome evolution via chromosome sorting

(2015) V. A. Lukhtanov et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Comprehensive survey of condition-specific reproductive isolation reveals genetic incompatibility in yeast

(2015) Jing Hou et al.   Nature Communications

Metabolic variation in natural populations of wild yeast

(2015) Pedram Samani et al.   Ecology and Evolution

HOW COMMON IS HOMOPLOID HYBRID SPECIATION?

(2014) Molly Schumer et al.   EVOLUTION

A High-Definition View of Functional Genetic Variation from Natural Yeast Genomes

(2014) Anders Bergström et al.   MOLECULAR BIOLOGY AND EVOLUTION

Chromosomal variation segregates within incipient species and correlates with reproductive isolation

(2014) Guillaume Charron et al.   MOLECULAR ECOLOGY

Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA

(2014) Emilia Huerta-Sánchez et al.   NATURE

Local climatic adaptation in a widespread microorganism

(2014) J.-B. Leducq et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Climatic and biotic velocities for woody taxa distributions over the last 16 000 years in eastern North America

(2013) Alejandro Ordonez et al.   ECOLOGY LETTERS

Exploring the northern limit of the distribution ofSaccharomyces cerevisiaeandSaccharomyces paradoxusin North America

(2013) Guillaume Charron et al.   FEMS YEAST RESEARCH

Mixing of vineyard and oak-tree ecotypes ofSaccharomyces cerevisiaein North American vineyards

(2013) Katie E. Hyma et al.   MOLECULAR ECOLOGY

A Systematic Approach for the Genetic Dissection of Protein Complexes in Living Cells

(2013) Guillaume Diss et al.   Cell Reports

Recurrent Rearrangement during Adaptive Evolution in an Interspecific Yeast Hybrid Suggests a Model for Rapid Introgression

(2013) Barbara Dunn et al.   PLoS Genetics

Surprisingly diverged populations ofSaccharomyces cerevisiaein natural environments remote from human activity

(2012) Qi-Ming Wang et al.   MOLECULAR ECOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Ecological structuring of yeasts associated with trees around Hamilton, Ontario, Canada

(2011) Harinad Maganti et al.   FEMS YEAST RESEARCH

Correlation of maple sap composition with bacterial and fungal communities determined by multiplex automated ribosomal intergenic spacer analysis (MARISA)

(2011) Marie Filteau et al.   FOOD MICROBIOLOGY

Thermal adaptation and ecological speciation

(2011) I. KELLER et al.   MOLECULAR ECOLOGY

Microbe domestication and the identification of the wild genetic stock of lager-brewing yeast

(2011) D. Libkind et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Outcrossing, mitotic recombination, and life-history trade-offs shape genome evolution inSaccharomyces cerevisiae

(2011) Paul M. Magwene et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Population genomics and local adaptation in wild isolates of a model microbial eukaryote

(2011) C. E. Ellison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Saccharomyces paradoxus and Saccharomyces cerevisiae reside on oak trees in New Zealand: evidence for migration from Europe and interspecies hybrids

(2010) Hanyao Zhang et al.   FEMS YEAST RESEARCH

Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control

(2010) D. E. Neafsey et al.   GENOME RESEARCH

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

Population genomics of domestic and wild yeasts

(2009) Gianni Liti et al.   NATURE