标题
Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors
作者
关键词
-
出版物
Scientific Data
Volume 3, Issue -, Pages 160030
出版商
Springer Nature
发表日期
2016-05-10
DOI
10.1038/sdata.2016.30
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
- (2015) Felipe A. Simão et al. BIOINFORMATICS
- Ecotoxicological assessment of cimetidine and determination of its potential for endocrine disruption using three test organisms: Daphnia magna, Moina macrocopa, and Danio rerio
- (2015) Saeram Lee et al. CHEMOSPHERE
- The occurrence and ecological risk assessment of phthalate esters (PAEs) in urban aquatic environments of China
- (2015) Lulu Zhang et al. ECOTOXICOLOGY
- A metabolomic study on the responses of daphnia magna exposed to silver nitrate and coated silver nanoparticles
- (2015) LianZhen Li et al. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY
- Accumulation Dynamics and Acute Toxicity of Silver Nanoparticles to Daphnia magna and Lumbriculus variegatus: Implications for Metal Modeling Approaches
- (2015) Farhan R. Khan et al. ENVIRONMENTAL SCIENCE & TECHNOLOGY
- SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads
- (2014) Y. Xie et al. BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits
- (2014) Jarkko Routtu et al. BMC GENOMICS
- Functional genomics of acclimation and adaptation in response to thermal stress in Daphnia
- (2014) Lev Y Yampolsky et al. BMC GENOMICS
- A millennial-scale chronicle of evolutionary responses to cultural eutrophication inDaphnia
- (2014) Dagmar Frisch et al. ECOLOGY LETTERS
- Variation in toxicity of a current-use insecticide among resurrected Daphnia pulicaria genotypes
- (2014) Adam M. Simpson et al. ECOTOXICOLOGY
- The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera
- (2014) Virpi Ahola et al. Nature Communications
- Competitive Outcome of Daphnia-Simocephalus Experimental Microcosms: Salinity versus Priority Effects
- (2013) Cláudia Loureiro et al. PLoS One
- High-throughput DNA sequencing errors are reduced by orders of magnitude using circle sequencing
- (2013) D. I. Lou et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels
- (2012) Marcel H. Schulz et al. BIOINFORMATICS
- The evolution of salinity tolerance inDaphnia: a functional genomics approach
- (2012) Leigh C. Latta et al. ECOLOGY LETTERS
- Genomic signature of natural and anthropogenic stress in wild populations of the waterfleaDaphnia magna: validation in space, time and experimental evolution
- (2012) LUISA ORSINI et al. MOLECULAR ECOLOGY
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Linking genes to communities and ecosystems: Daphnia as an ecogenomic model
- (2012) B. E. Miner et al. PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects
- (2011) Carson Holt et al. BMC BIOINFORMATICS
- Genotype × genotype interactions between the toxic cyanobacteriumMicrocystisand its grazer, the waterfleaDaphnia
- (2011) Veerle Lemaire et al. Evolutionary Applications
- An Integrated Multi-Disciplinary Approach for Studying Multiple Stressors in Freshwater Ecosystems: Daphnia as a Model Organism
- (2011) Ianina Altshuler et al. INTEGRATIVE AND COMPARATIVE BIOLOGY
- Interclonal variation, effectiveness and long-term implications of Triops-induced morphological defences in Daphnia magna Strauss
- (2011) M. Rabus et al. JOURNAL OF PLANKTON RESEARCH
- Full-length transcriptome assembly from RNA-Seq data without a reference genome
- (2011) Manfred G Grabherr et al. NATURE BIOTECHNOLOGY
- The Ecoresponsive Genome of Daphnia pulex
- (2011) J. K. Colbourne et al. SCIENCE
- Gene up-regulation in response to predator kairomones in the water flea, Daphnia pulex
- (2010) Hitoshi Miyakawa et al. BMC DEVELOPMENTAL BIOLOGY
- The first-generation Daphnia magna linkage map
- (2010) Jarkko Routtu et al. BMC GENOMICS
- Fitness and virulence of a bacterial endoparasite in an environmentally stressed crustacean host
- (2010) ANJA COORS et al. PARASITOLOGY
- Phenotypic plasticity facilitates recurrent rapid adaptation to introduced predators
- (2010) A. G. Scoville et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- An ancient immunity gene duplication in Daphnia magna: RNA expression and sequence analysis of two nitric oxide synthase genes
- (2009) Pierrick Labbé et al. DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY
- How to map billions of short reads onto genomes
- (2009) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- The scale of divergence: A phylogenetic appraisal of intercontinental allopatric speciation in a passively dispersed freshwater zooplankton genus
- (2008) Sarah J. Adamowicz et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
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