Excavating the surface-associated and secretory proteome ofMycobacterium lepraefor identifying vaccines and diagnostic markers relevant immunodominant epitopes

Comparative evaluation of antibody detection tests to facilitate the diagnosis of multibacillary leprosy

(2016) Malcolm S. Duthie et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The drug binding sites and transport mechanism of the RND pumps from Mycobacterium tuberculosis: Insights from molecular dynamics simulations

(2016) Padmani Sandhu et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

In-silico analysis of Pasteurella multocida to identify common epitopes between fowl, goat and buffalo

(2016) Ammarah Ghaffar et al.   GENE

A multi-subunit based, thermodynamically stable model vaccine using combined immunoinformatics and protein structure based approach

(2016) Aarti Rana et al.   IMMUNOBIOLOGY

Recombinant BCG prime and PPE protein boost provides potent protection against acute Mycobacterium tuberculosis infection in mice

(2016) Enzhuo Yang et al.   MICROBIAL PATHOGENESIS

Identification of Novel Vaccine Candidates againstCampylobacterthrough Reverse Vaccinology

(2016) Marine Meunier et al.   Journal of Immunology Research

In silico epitope analysis of unique and membrane associated proteins from Mycobacterium avium subsp. paratuberculosis for immunogenicity and vaccine evaluation

(2015) Perla Carlos et al.   JOURNAL OF THEORETICAL BIOLOGY

Proteome-scale identification and characterization of mitochondria targeting proteins of Mycobacterium avium subspecies paratuberculosis: Potential virulence factors modulating host mitochondrial function

(2015) Aarti Rana et al.   MITOCHONDRION

Identification of secreted proteins as novel antigenic vaccine candidates of Haemophilus parasuis serovar 5

(2015) Miao Li et al.   VACCINE

Proteome-scale identification of outer membrane proteins in Mycobacterium avium subspecies paratuberculosis using a structure based combined hierarchical approach

(2014) Aarti Rana et al.   Molecular BioSystems

PCR-Based Techniques for Leprosy Diagnosis: From the Laboratory to the Clinic

(2014) Alejandra Nóbrega Martinez et al.   PLoS Neglected Tropical Diseases

Reverse vaccinology in the 21st century: improvements over the original design

(2013) Claudio Donati et al.   Annals of the New York Academy of Sciences

Recent Advances in Understanding Enteric Pathogenic Escherichia coli

(2013) M. A. Croxen et al.   CLINICAL MICROBIOLOGY REVIEWS

Interaction of Mycobacterium leprae with Human Airway Epithelial Cells: Adherence, Entry, Survival, and Identification of Potential Adhesins by Surface Proteome Analysis

(2013) Carlos A. M. Silva et al.   INFECTION AND IMMUNITY

Rapid Quantitative Serological Test for Detection of Infection with Mycobacterium leprae, the Causative Agent of Leprosy

(2013) M. S. Duthie et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Chemical datuments as scientific enablers

(2013) Henry S Rzepa   Journal of Cheminformatics

In SilicoIdentification of Epitopes in Mycobacterium avium subsp.paratuberculosisProteins That Were Upregulated under Stress Conditions

(2012) Ratna B. Gurung et al.   Clinical and Vaccine Immunology

Developing vaccines in the era of genomics: a decade of reverse vaccinology

(2012) K.L. Seib et al.   CLINICAL MICROBIOLOGY AND INFECTION

Drug and Multidrug Resistance among Mycobacterium leprae Isolates from Brazilian Relapsed Leprosy Patients

(2012) Adalgiza da Silva Rocha et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Identification of serological biomarkers of infection, disease progression and treatment efficacy for leprosy

(2012) John S Spencer et al.   MEMORIAS DO INSTITUTO OSWALDO CRUZ

Immune epitope database analysis resource

(2012) Y. Kim et al.   NUCLEIC ACIDS RESEARCH

LigPlot+: Multiple Ligand–Protein Interaction Diagrams for Drug Discovery

(2011) Roman A. Laskowski et al.   Journal of Chemical Information and Modeling

Evaluation of the immunogenicity of Mycobacterium avium subsp. paratuberculosis (MAP) stress-associated recombinant proteins

(2011) Satoko Kawaji et al.   VETERINARY MICROBIOLOGY

Mass spectrometry data processing using zero-crossing lines in multi-scale of Gaussian derivative wavelet

(2010) N. Nguyen et al.   BIOINFORMATICS

PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes

(2010) Nancy Y. Yu et al.   BIOINFORMATICS

Analysis of Antibody Responses toMycobacterium lepraePhenolic Glycolipid I, Lipoarabinomannan, and Recombinant Proteins To Define Disease Subtype-Specific Antigenic Profiles in Leprosy

(2010) John S. Spencer et al.   Clinical and Vaccine Immunology

Is Phenolic Glycolipid–I Really a Specific Antigen for Leprosy?

(2010) Roma Sinha et al.   CLINICAL INFECTIOUS DISEASES

Lipoproteins of Bacterial Pathogens

(2010) A. Kovacs-Simon et al.   INFECTION AND IMMUNITY

Outer membrane pore protein prediction in mycobacteria using genomic comparison

(2010) N. Mah et al.   MICROBIOLOGY-SGM

Selection of representative protein data sets

(2010) Uwe Hobohm et al.   PROTEIN SCIENCE

Mycobacterial outer membranes: in search of proteins

(2010) Michael Niederweis et al.   TRENDS IN MICROBIOLOGY

The MycoBrowser portal: A comprehensive and manually annotated resource for mycobacterial genomes

(2010) Adamandia Kapopoulou et al.   TUBERCULOSIS

From Genome-Based In Silico Predictions to Ex Vivo Verification of Leprosy Diagnosis

(2009) A. Geluk et al.   Clinical and Vaccine Immunology

Immunoinformatics: Current trends and future directions

(2009) Joo Chuan Tong et al.   DRUG DISCOVERY TODAY

Assessment of vaccine potential of the Neisseria-specific protein NMB0938

(2009) Gretel Sardiñas et al.   VACCINE

ElliPro: a new structure-based tool for the prediction of antibody epitopes

(2008) Julia Ponomarenko et al.   BMC BIOINFORMATICS

Characterization of an Outer Membrane Protein of Salmonella enterica Serovar Typhimurium That Confers Protection against Typhoid

(2008) N. Hamid et al.   Clinical and Vaccine Immunology

Rv1698 ofMycobacterium tuberculosisRepresents a New Class of Channel-forming Outer Membrane Proteins

(2008) Axel Siroy et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Prediction of Lipoprotein Signal Peptides in Gram-Positive Bacteria with a Hidden Markov Model

(2008) Pantelis G. Bagos et al.   JOURNAL OF PROTEOME RESEARCH

The Jpred 3 secondary structure prediction server

(2008) C. Cole et al.   NUCLEIC ACIDS RESEARCH

NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8–11

(2008) Claus Lundegaard et al.   NUCLEIC ACIDS RESEARCH

Deciphering the proteomic profile of Mycobacterium leprae cell envelope

(2008) Maria Angela M. Marques et al.   PROTEOMICS

Identification of outer membrane proteins of Mycobacterium tuberculosis

(2008) Houhui Song et al.   TUBERCULOSIS

A Systematic Assessment of MHC Class II Peptide Binding Predictions and Evaluation of a Consensus Approach

(2008) Peng Wang et al.   PLoS Computational Biology

Genome scale portrait of cAMP-receptor protein (CRP) regulons in mycobacteria points to their role in pathogenesis

(2007) Yusuf Akhter et al.   GENE