ATPase activity of the DEAD-box protein Dhh1 controls processing body formation

ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure

(2016) Saumya Jain et al.   CELL

Use of the MS2 aptamer and coat protein for RNA localization in yeast: A response to “MS2 coat proteins bound to yeast mRNAs block 5′ to 3′ degradation and trap mRNA decay products: implications for the localization of mRNAs by MS2-MCP system”

(2016) Gal Haimovich et al.   RNA

Ubiquitous accumulation of 3′ mRNA decay fragments inSaccharomyces cerevisiaemRNAs with chromosomally integrated MS2 arrays

(2016) Jennifer F. Garcia et al.   RNA

Translational Capacity of a Cell Is Determined during Transcription Elongation via the Ccr4-Not Complex

(2016) Ishaan Gupta et al.   Cell Reports

Ccr4-Not is at the core of the eukaryotic gene expression circuitry

(2015) Z. Villanyi et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Not4-dependent translational repression is important for cellular protein homeostasis in yeast

(2015) S. Preissler et al.   EMBO JOURNAL

The conformational plasticity of eukaryotic RNA-dependent ATPases

(2015) Sevim Ozgur et al.   FEBS Journal

It’s Raining Liquids: RNA Tunes Viscoelasticity and Dynamics of Membraneless Organelles

(2015) Lin Guo et al.   MOLECULAR CELL

MS2 coat proteins bound to yeast mRNAs block 5' to 3' degradation and trap mRNA decay products: implications for the localization of mRNAs by MS2-MCP system

(2015) J. F. Garcia et al.   RNA

Structure of a Human 4E-T/DDX6/CNOT1 Complex Reveals the Different Interplay of DDX6-Binding Proteins with the CCR4-NOT Complex

(2015) Sevim Ozgur et al.   Cell Reports

Promiscuous interactions and protein disaggregases determine the material state of stress-inducible RNP granules

(2015) Sonja Kroschwald et al.   eLife

In Vitro Reconstitution of a Cellular Phase-Transition Process that Involves the mRNA Decapping Machinery

(2014) Simon A. Fromm et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Quantifying mRNA targeting to P-bodies in living human cells reveals their dual role in mRNA decay and storage

(2014) Adva Aizer et al.   JOURNAL OF CELL SCIENCE

A DDX6-CNOT1 Complex and W-Binding Pockets in CNOT9 Reveal Direct Links between miRNA Target Recognition and Silencing

(2014) Ying Chen et al.   MOLECULAR CELL

Structural and Biochemical Insights to the Role of the CCR4-NOT Complex and DDX6 ATPase in MicroRNA Repression

(2014) Hansruedi Mathys et al.   MOLECULAR CELL

Promoter sequences direct cytoplasmic localization and translation of mRNAs during starvation in yeast

(2014) Brian M. Zid et al.   NATURE

Human DDX6 effects miRNA-mediated gene silencing via direct binding to CNOT1

(2014) Christopher Rouya et al.   RNA

Granules Harboring Translationally Active mRNAs Provide a Platform for P-Body Formation following Stress

(2014) Jennifer Lui et al.   Cell Reports

The role of the E3 ligase Not4 in cotranslational quality control

(2014) Olesya O. Panasenko   Frontiers in Genetics

RNA decay machines: The exosome

(2013) Aleksander Chlebowski et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Eukaryotic Stress Granules Are Cleared by Autophagy and Cdc48/VCP Function

(2013) J. Ross Buchan et al.   CELL

Tri-track: Free Software for Large-Scale Particle Tracking

(2013) Pascal Vallotton et al.   MICROSCOPY AND MICROANALYSIS

Global Analysis of Eukaryotic mRNA Degradation Reveals Xrn1-Dependent Buffering of Transcript Levels

(2013) Mai Sun et al.   MOLECULAR CELL

Determinants of robustness in spindle assembly checkpoint signalling

(2013) Stephanie Heinrich et al.   NATURE CELL BIOLOGY

Structural analysis of the yeast Dhh1–Pat1 complex reveals how Dhh1 engages Pat1, Edc3 and RNA in mutually exclusive interactions

(2013) Humayun Sharif et al.   NUCLEIC ACIDS RESEARCH

Crystal structure of the human eIF4AIII-CWC22 complex shows how a DEAD-box protein is inhibited by a MIF4G domain

(2013) G. Buchwald et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Getting RNA and Protein in Phase

(2012) Stephanie C. Weber et al.   CELL

Processing Body and Stress Granule Assembly Occur by Independent and Differentially Regulated Pathways in Saccharomyces cerevisiae

(2012) K. H. Shah et al.   GENETICS

The diverse functions of germline P-granules inCaenorhabditis elegans

(2012) Ekaterina Voronina   MOLECULAR REPRODUCTION AND DEVELOPMENT

Single-molecule analysis of gene expression using two-color RNA labeling in live yeast

(2012) Sami Hocine et al.   NATURE METHODS

Toward a molecular understanding of RNA remodeling by DEAD-box proteins

(2012) Rick Russell et al.   RNA Biology

Multiple binding of repressed mRNAs by the P-body protein Rck/p54

(2012) M. Ernoult-Lange et al.   RNA

P-Bodies and Stress Granules: Possible Roles in the Control of Translation and mRNA Degradation

(2012) C. J. Decker et al.   Cold Spring Harbor Perspectives in Biology

The DEAD-Box Protein Dhh1 Promotes Decapping by Slowing Ribosome Movement

(2012) Thomas Sweet et al.   PLOS BIOLOGY

Sequestration of Highly Expressed mRNAs in Cytoplasmic Granules, P-Bodies, and Stress Granules Enhances Cell Viability

(2012) Anna Lavut et al.   PLoS Genetics

The structural basis of Edc3- and Scd6-mediated activation of the Dcp1:Dcp2 mRNA decapping complex

(2011) Simon A Fromm et al.   EMBO JOURNAL

The multifunctional Ccr4–Not complex directly promotes transcription elongation

(2011) Jennifer A. Kruk et al.   GENES & DEVELOPMENT

Intermolecular Interactions within the Abundant DEAD-box Protein Dhh1 Regulate Its Activityin Vivo

(2011) Arnob Dutta et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The DExD/H box ATPase Dhh1 functions in translational repression, mRNA decay, and processing body dynamics

(2011) Johanna S. Carroll et al.   JOURNAL OF CELL BIOLOGY

Cytoplasmic mRNP granules at a glance

(2011) S. L. Erickson et al.   JOURNAL OF CELL SCIENCE

Mechanism of Mss116 ATPase Reveals Functional Diversity of DEAD-Box Proteins

(2011) Wenxiang Cao et al.   JOURNAL OF MOLECULAR BIOLOGY

The cAMP-Dependent Protein Kinase Signaling Pathway Is a Key Regulator of P Body Foci Formation

(2011) Vidhya Ramachandran et al.   MOLECULAR CELL

Deep proteome and transcriptome mapping of a human cancer cell line

(2011) N. Nagaraj et al.   Molecular Systems Biology

A conserved mechanism of DEAD-box ATPase activation by nucleoporins and InsP6 in mRNA export

(2011) Ben Montpetit et al.   NATURE

From unwinding to clamping — the DEAD box RNA helicase family

(2011) Patrick Linder et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Cytoplasmic deadenylation: regulation of mRNA fate

(2010) Katrin Wiederhold et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

eIF4G stimulates the activity of the DEAD box protein eIF4A by a conformational guidance mechanism

(2010) Manuel Hilbert et al.   NUCLEIC ACIDS RESEARCH

Pathway of ATP utilization and duplex rRNA unwinding by the DEAD-box helicase, DbpA

(2010) A. Henn et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Stress granules

(2009) Paul Anderson et al.   CURRENT BIOLOGY

Structural Basis for the Mutually Exclusive Anchoring of P Body Components EDC3 and Tral to the DEAD Box Protein DDX6/Me31B

(2009) Felix Tritschler et al.   MOLECULAR CELL

Phosphate release contributes to the rate-limiting step for unwinding by an RNA helicase

(2009) Qixin Wang et al.   NUCLEIC ACIDS RESEARCH

P bodies promote stress granule assembly inSaccharomyces cerevisiae

(2008) J. Ross Buchan et al.   JOURNAL OF CELL BIOLOGY

The Dynamics of Mammalian P Body Transport, Assembly, and Disassembly In Vivo

(2008) Adva Aizer et al.   MOLECULAR BIOLOGY OF THE CELL

Crystal structure of the yeast eIF4A-eIF4G complex: An RNA-helicase controlled by protein-protein interactions

(2008) P. Schutz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA