Correlation-Based Network Generation, Visualization, and Analysis as a Powerful Tool in Biological Studies: A Case Study in Cancer Cell Metabolism

Combined correlation-based network and mQTL analyses efficiently identified loci for branched-chain amino acid, serine to threonine, and proline metabolism in tomato seeds

(2014) David Toubiana et al.   PLANT JOURNAL

Gene co-expression network analysis reveals common system-level properties of prognostic genes across cancer types

(2014) Yang Yang et al.   Nature Communications

Analysis of a gene co-expression network establishes robust association between Col5a2 and ischemic heart disease

(2013) Francisco Azuaje et al.   BMC Medical Genomics

A novel untargeted metabolomics correlation-based network analysis incorporating human metabolic reconstructions

(2013) Helen L Kotze et al.   BMC Systems Biology

Cancer as a metabolic disease: implications for novel therapeutics

(2013) T. N. Seyfried et al.   CARCINOGENESIS

Integrative approaches for finding modular structure in biological networks

(2013) Koyel Mitra et al.   NATURE REVIEWS GENETICS

Biological network analysis: insights into structure and functions

(2012) X. Ma et al.   Briefings in Functional Genomics

Network analysis: tackling complex data to study plant metabolism

(2012) David Toubiana et al.   TRENDS IN BIOTECHNOLOGY

Metabolic Profiling of a Mapping Population Exposes New Insights in the Regulation of Seed Metabolism and Seed, Fruit, and Plant Relations

(2012) David Toubiana et al.   PLoS Genetics

Metabolomics for mitochondrial and cancer studies

(2011) Deepak Nagrath et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Microbial Metabolomics

(2011) Jane Tang   CURRENT GENOMICS

Two-Phase Resolution of Polyploidy in theArabidopsisMetabolic Network Gives Rise to Relative and Absolute Dosage Constraints

(2011) Michaël Bekaert et al.   PLANT CELL

Hypoxia promotes isocitrate dehydrogenase-dependent carboxylation of  -ketoglutarate to citrate to support cell growth and viability

(2011) D. R. Wise et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Network medicine: a network-based approach to human disease

(2010) Albert-László Barabási et al.   NATURE REVIEWS GENETICS

Understanding the Warburg Effect: The Metabolic Requirements of Cell Proliferation

(2009) M. G. Vander Heiden et al.   SCIENCE

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Evaluation of lactate and alanine as metabolic biomarkers of prostate cancer using1H HR-MAS spectroscopy of biopsy tissues

(2008) May-Britt Tessem et al.   MAGNETIC RESONANCE IN MEDICINE