High-Throughput Identification of Adaptive Mutations in Experimentally Evolved Yeast Populations
出版年份 2016 全文链接
标题
High-Throughput Identification of Adaptive Mutations in Experimentally Evolved Yeast Populations
作者
关键词
Mutation detection, Point mutation, Evolutionary genetics, Deletion mutation, Fungal evolution, Saccharomyces cerevisiae, Genetic screens, Yeast
出版物
PLoS Genetics
Volume 12, Issue 10, Pages e1006339
出版商
Public Library of Science (PLoS)
发表日期
2016-10-12
DOI
10.1371/journal.pgen.1006339
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Comprehensive Analysis of the SUL1 Promoter of Saccharomyces cerevisiae
- (2016) Matthew S. Rich et al. GENETICS
- An extended set of yeast-based functional assays accurately identifies human disease mutations
- (2016) Song Sun et al. GENOME RESEARCH
- Comprehensive Analysis of the SUL1 Promoter of Saccharomyces cerevisiae
- (2016) Matthew S. Rich et al. GENETICS
- The Fitness Consequences of Aneuploidy Are Driven by Condition-Dependent Gene Effects
- (2015) Anna B. Sunshine et al. PLOS BIOLOGY
- The Yeast Deletion Collection: A Decade of Functional Genomics
- (2014) Guri Giaever et al. GENETICS
- Recurrent PTPRB and PLCG1 mutations in angiosarcoma
- (2014) Sam Behjati et al. NATURE GENETICS
- Empirical fitness landscapes and the predictability of evolution
- (2014) J. Arjan G.M. de Visser et al. NATURE REVIEWS GENETICS
- Precise estimates of mutation rate and spectrum in yeast
- (2014) Y. O. Zhu et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Global epistasis makes adaptation predictable despite sequence-level stochasticity
- (2014) S. Kryazhimskiy et al. SCIENCE
- Loss-of-heterozygosity facilitates passage through Haldane’s sieve for Saccharomyces cerevisiae undergoing adaptation
- (2014) A. C. Gerstein et al. Nature Communications
- A Comprehensive tRNA Deletion Library Unravels the Genetic Architecture of the tRNA Pool
- (2014) Zohar Bloom-Ackermann et al. PLoS Genetics
- Molecular Specificity, Convergence and Constraint Shape Adaptive Evolution in Nutrient-Poor Environments
- (2014) Jungeui Hong et al. PLoS Genetics
- Gene Copy-Number Alterations: A Cost-Benefit Analysis
- (2013) Yun-Chi Tang et al. CELL
- Synchronous Waves of Failed Soft Sweeps in the Laboratory: Remarkably Rampant Clonal Interference of Alleles at a Single Locus
- (2013) M.-C. Lee et al. GENETICS
- The million mutation project: A new approach to genetics in Caenorhabditis elegans
- (2013) O. Thompson et al. GENOME RESEARCH
- Genome-wide Consequences of Deleting Any Single Gene
- (2013) Xinchen Teng et al. MOLECULAR CELL
- Mutational heterogeneity in cancer and the search for new cancer-associated genes
- (2013) Michael S. Lawrence et al. NATURE
- Cancer genome-sequencing study design
- (2013) Jill C. Mwenifumbo et al. NATURE REVIEWS GENETICS
- The Dynamics of Diverse Segmental Amplifications in Populations of Saccharomyces cerevisiae Adapting to Strong Selection
- (2013) Celia Payen et al. G3-Genes Genomes Genetics
- Parallel Evolutionary Dynamics of Adaptive Diversification in Escherichia coli
- (2013) Matthew D. Herron et al. PLOS BIOLOGY
- Whole Genome, Whole Population Sequencing Reveals That Loss of Signaling Networks Is the Major Adaptive Strategy in a Constant Environment
- (2013) Daniel J. Kvitek et al. PLoS Genetics
- Mutational effects depend on ploidy level: all else is not equal
- (2012) A. C. Gerstein Biology Letters
- A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
- (2012) Pablo Cingolani et al. FLY
- Parallel Genetic Changes and Nonparallel Gene-Environment Interactions Characterize the Evolution of Drug Resistance in Yeast
- (2012) A. C. Gerstein et al. GENETICS
- Identification of dosage-sensitive genes in Saccharomyces cerevisiae using the genetic tug-of-war method
- (2012) K. Makanae et al. GENOME RESEARCH
- Genomic analysis of a key innovation in an experimental Escherichia coli population
- (2012) Zachary D. Blount et al. NATURE
- Systematic identification of gene annotation errors in the widely used yeast mutation collections
- (2012) Taly Ben-Shitrit et al. NATURE METHODS
- Functional impact bias reveals cancer drivers
- (2012) Abel Gonzalez-Perez et al. NUCLEIC ACIDS RESEARCH
- How does adaptation sweep through the genome? Insights from long-term selection experiments
- (2012) M. K. Burke PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- The Molecular Diversity of Adaptive Convergence
- (2012) O. Tenaillon et al. SCIENCE
- The Genomic Landscape and Evolutionary Resolution of Antagonistic Pleiotropy in Yeast
- (2012) Wenfeng Qian et al. Cell Reports
- Functional Analysis With a Barcoder Yeast Gene Overexpression System
- (2012) Alison C. Douglas et al. G3-Genes Genomes Genetics
- Dosage suppression genetic interaction networks enhance functional wiring diagrams of the cell
- (2011) Leslie Magtanong et al. NATURE BIOTECHNOLOGY
- Knocking out multigene redundancies via cycles of sexual assortment and fluorescence selection
- (2011) Yo Suzuki et al. NATURE METHODS
- Evidence for Hitchhiking of Deleterious Mutations within the Human Genome
- (2011) Sung Chun et al. PLoS Genetics
- Reciprocal Sign Epistasis between Frequently Experimentally Evolved Adaptive Mutations Causes a Rugged Fitness Landscape
- (2011) Daniel J. Kvitek et al. PLoS Genetics
- Hunger Artists: Yeast Adapted to Carbon Limitation Show Trade-Offs under Carbon Sufficiency
- (2011) Jared W. Wenger et al. PLoS Genetics
- Population-Based Resequencing of Experimentally Evolved Populations Reveals the Genetic Basis of Body Size Variation in Drosophila melanogaster
- (2011) Thomas L. Turner et al. PLoS Genetics
- High-resolution mapping of protein sequence-function relationships
- (2010) Douglas M Fowler et al. NATURE METHODS
- Adaptation to diverse nitrogen-limited environments by deletion or extrachromosomal element formation of the GAP1 locus
- (2010) D. Gresham et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Genetic Landscape of a Cell
- (2010) M. Costanzo et al. SCIENCE
- Systematic analysis of genome-wide fitness data in yeast reveals novel gene function and drug action
- (2010) Maureen E Hillenmeyer et al. GENOME BIOLOGY
- Quantitative phenotyping via deep barcode sequencing
- (2009) A. M. Smith et al. GENOME RESEARCH
- Genome evolution and adaptation in a long-term experiment with Escherichia coli
- (2009) Jeffrey E. Barrick et al. NATURE
- A molecular barcoded yeast ORF library enables mode-of-action analysis of bioactive compounds
- (2009) Cheuk Hei Ho et al. NATURE BIOTECHNOLOGY
- Fast Growth Increases the Selective Advantage of a Mutation Arising Recurrently during Evolution under Metal Limitation
- (2009) Hsin-Hung Chou et al. PLoS Genetics
- Molecular characterization of clonal interference during adaptive evolution in asexual populations of Saccharomyces cerevisiae
- (2008) Katy C Kao et al. NATURE GENETICS
- Yeast Barcoders: a chemogenomic application of a universal donor-strain collection carrying bar-code identifiers
- (2008) Zhun Yan et al. NATURE METHODS
- The Chemical Genomic Portrait of Yeast: Uncovering a Phenotype for All Genes
- (2008) M. E. Hillenmeyer et al. SCIENCE
- The Repertoire and Dynamics of Evolutionary Adaptations to Controlled Nutrient-Limited Environments in Yeast
- (2008) David Gresham et al. PLoS Genetics
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreDiscover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversation