Non-monotonic Response to Monotonic Stimulus: Regulation of Glyoxylate Shunt Gene-Expression Dynamics in Mycobacterium tuberculosis

Finding the positive feedback loops underlying multi-stationarity

(2015) Elisenda Feliu et al.   BMC Systems Biology

The Mycobacterium tuberculosis ClpP1P2 Protease Interacts Asymmetrically with Its ATPase Partners ClpX and ClpC1

(2015) Julia Leodolter et al.   PLoS One

N-site Phosphorylation Systems with 2N-1 Steady States

(2014) Dietrich Flockerzi et al.   BULLETIN OF MATHEMATICAL BIOLOGY

TheMycobacterium tuberculosisClp Gene Regulator Is Required forin VitroReactivation from Hypoxia-induced Dormancy

(2014) Amanda McGillivray et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Latent Tuberculosis Infection: Myths, Models, and Molecular Mechanisms

(2014) N. K. Dutta et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The Mycobacterium tuberculosis Rv2745c Plays an Important Role in Responding to Redox Stress

(2014) Amanda McGillivray et al.   PLoS One

Metabolomics: A window into the adaptive physiology of Mycobacterium tuberculosis

(2014) Hyungjin Eoh   TUBERCULOSIS

ClpP deletion causes attenuation of Salmonella Typhimurium virulence through mis-regulation of RpoS and indirect control of CsrA and the SPI genes

(2013) G. M. Knudsen et al.   MICROBIOLOGY-SGM

IdeR is required for iron homeostasis and virulence inMycobacterium tuberculosis

(2013) Ruchi Pandey et al.   MOLECULAR MICROBIOLOGY

A Whole-Cell Computational Model Predicts Phenotype from Genotype

(2012) Jonathan R. Karr et al.   CELL

Concordant chemical reaction networks and the Species-Reaction Graph

(2012) Guy Shinar et al.   MATHEMATICAL BIOSCIENCES

Regulation of a quorum sensing system by stationary phase sigma factor RpoS and their co-regulation of target genes
 in Burkholderia pseudomallei

(2012) Patompon Wongtrakoongate et al.   MICROBIOLOGY AND IMMUNOLOGY

Ultrasensitivity of the Bacillus subtilis sporulation decision

(2012) J. Narula et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Validation of the Essential ClpP Protease in Mycobacterium tuberculosis as a Novel Drug Target

(2011) J. Ollinger et al.   JOURNAL OF BACTERIOLOGY

Regulation of Central Metabolism Genes of Mycobacterium tuberculosis by Parallel Feed-Forward Loops Controlled by Sigma Factor E ( E)

(2010) P. Datta et al.   JOURNAL OF BACTERIOLOGY

Mycobacterium tuberculosisMT2816 Encodes a Key Stress‐Response Regulator

(2010) Smriti Mehra et al.   JOURNAL OF INFECTIOUS DISEASES

ClgR regulation of chaperone and protease systems is essential for Mycobacterium tuberculosis parasitism of the macrophage

(2010) M. Estorninho et al.   MICROBIOLOGY-SGM

Carbon flux rerouting during Mycobacterium tuberculosis growth arrest

(2010) Lanbo Shi et al.   MOLECULAR MICROBIOLOGY

Defining Network Topologies that Can Achieve Biochemical Adaptation

(2009) Wenzhe Ma et al.   CELL

The Mycobacterium tuberculosis Sigma Factor  B Is Required for Full Response to Cell Envelope Stress and Hypoxia In Vitro, but It Is Dispensable for In Vivo Growth

(2009) P. A. Fontan et al.   JOURNAL OF BACTERIOLOGY

RseA, the SigE specific anti-sigma factor ofMycobacterium tuberculosis, is inactivated by phosphorylation-dependent ClpC1P2 proteolysis

(2009) Subhasis Barik et al.   MOLECULAR MICROBIOLOGY

An integrated regulatory network including two positive feedback loops to modulate the activity of σEin mycobacteria

(2009) Riccardo Manganelli et al.   MOLECULAR MICROBIOLOGY

Tuberculous Granulomas Are Hypoxic in Guinea Pigs, Rabbits, and Nonhuman Primates

(2008) L. E. Via et al.   INFECTION AND IMMUNITY

Modelling and analysis of gene regulatory networks

(2008) Guy Karlebach et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY