标题
The genetic regulatory signature of type 2 diabetes in human skeletal muscle
作者
关键词
-
出版物
Nature Communications
Volume 7, Issue -, Pages 11764
出版商
Springer Nature
发表日期
2016-06-29
DOI
10.1038/ncomms11764
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- RNA-Enrich: a cut-off free functional enrichment testing method for RNA-seq with improved detection power
- (2015) Chee Lee et al. BIOINFORMATICS
- GREGOR: evaluating global enrichment of trait-associated variants in epigenomic features using a systematic, data-driven approach
- (2015) Ellen M. Schmidt et al. BIOINFORMATICS
- QoRTs: a comprehensive toolset for quality control and data processing of RNA-Seq experiments
- (2015) Stephen W. Hartley et al. BMC BIOINFORMATICS
- mTOR signaling in cellular and organismal energetics
- (2015) Verena Albert et al. CURRENT OPINION IN CELL BIOLOGY
- Bacterial infection remodels the DNA methylation landscape of human dendritic cells
- (2015) Alain Pacis et al. GENOME RESEARCH
- Integrative analysis of 111 reference human epigenomes
- (2015) Anshul Kundaje et al. NATURE
- HaploReg v4: systematic mining of putative causal variants, cell types, regulators and target genes for human complex traits and disease
- (2015) Lucas D. Ward et al. NUCLEIC ACIDS RESEARCH
- The MEME Suite
- (2015) Timothy L. Bailey et al. NUCLEIC ACIDS RESEARCH
- JASPAR 2016: a major expansion and update of the open-access database of transcription factor binding profiles
- (2015) Anthony Mathelier et al. NUCLEIC ACIDS RESEARCH
- The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
- (2015) et al. SCIENCE
- Motif signatures in stretch enhancers are enriched for disease-associated genetic variants
- (2015) Daniel X Quang et al. Epigenetics & Chromatin
- Characterization of functional methylomes by next-generation capture sequencing identifies novel disease-associated variants
- (2015) Fiona Allum et al. Nature Communications
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- minimac2: faster genotype imputation
- (2014) Christian Fuchsberger et al. BIOINFORMATICS
- Calcium signaling in insulin action on striated muscle
- (2014) A. Contreras-Ferrat et al. CELL CALCIUM
- Increased Interaction With Insulin Receptor Substrate 1, a Novel Abnormality in Insulin Resistance and Type 2 Diabetes
- (2014) Michael Caruso et al. DIABETES
- The human skeletal muscle transcriptome: sex differences, alternative splicing, and tissue homogeneity assessed with RNA sequencing
- (2014) Malene E. Lindholm et al. FASEB JOURNAL
- Genetic and epigenetic fine mapping of causal autoimmune disease variants
- (2014) Kyle Kai-How Farh et al. NATURE
- Global view of enhancer-promoter interactome in human cells
- (2014) B. He et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Quality of life along the diabetes continuum: a cross-sectional view of health-related quality of life and general health status in middle-aged and older Finns
- (2014) Saku Väätäinen et al. QUALITY OF LIFE RESEARCH
- Identification of a Regulatory Variant That Binds FOXA1 and FOXA2 at the CDC123/CAMK1D Type 2 Diabetes GWAS Locus
- (2014) Marie P. Fogarty et al. PLoS Genetics
- DeconRNASeq: a statistical framework for deconvolution of heterogeneous tissue samples based on mRNA-Seq data
- (2013) Ting Gong et al. BIOINFORMATICS
- Selective Inhibition of Tumor Oncogenes by Disruption of Super-Enhancers
- (2013) Jakob Lovén et al. CELL
- Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes
- (2013) Warren A. Whyte et al. CELL
- Super-Enhancers in the Control of Cell Identity and Disease
- (2013) Denes Hnisz et al. CELL
- DNA-Binding Specificities of Human Transcription Factors
- (2013) Arttu Jolma et al. CELL
- Expression of Phosphofructokinase in Skeletal Muscle Is Influenced by Genetic Variation and Associated With Insulin Sensitivity
- (2013) S. Keildson et al. DIABETES
- Pathophysiology and treatment of type 2 diabetes: perspectives on the past, present, and future
- (2013) Steven E Kahn et al. LANCET
- Transcriptome and genome sequencing uncovers functional variation in humans
- (2013) Tuuli Lappalainen et al. NATURE
- Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
- (2013) Jason D Buenrostro et al. NATURE METHODS
- Systematic discovery and characterization of regulatory motifs in ENCODE TF binding experiments
- (2013) P. Kheradpour et al. NUCLEIC ACIDS RESEARCH
- The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
- (2013) Danielle Welter et al. NUCLEIC ACIDS RESEARCH
- Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants
- (2013) S. C. J. Parker et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Detecting and Estimating Contamination of Human DNA Samples in Sequencing and Array-Based Genotype Data
- (2012) Goo Jun et al. AMERICAN JOURNAL OF HUMAN GENETICS
- Matrix eQTL: ultra fast eQTL analysis via large matrix operations
- (2012) A. A. Shabalin BIOINFORMATICS
- Detecting differential usage of exons from RNA-seq data
- (2012) S. Anders et al. GENOME RESEARCH
- GENCODE: The reference human genome annotation for The ENCODE Project
- (2012) J. Harrow et al. GENOME RESEARCH
- A single-nucleotide polymorphism in ANK1 is associated with susceptibility to type 2 diabetes in Japanese populations
- (2012) Minako Imamura et al. HUMAN MOLECULAR GENETICS
- Hydrophobic residues in small ankyrin 1 participate in binding to obscurin
- (2012) Chris D. Willis et al. MOLECULAR MEMBRANE BIOLOGY
- Diabetes in numbers
- (2012) Tony Scully NATURE
- Fast and accurate genotype imputation in genome-wide association studies through pre-phasing
- (2012) Bryan Howie et al. NATURE GENETICS
- Large-scale association analysis provides insights into the genetic architecture and pathophysiology of type 2 diabetes
- (2012) NATURE GENETICS
- Using probabilistic estimation of expression residuals (PEER) to obtain increased power and interpretability of gene expression analyses
- (2012) Oliver Stegle et al. Nature Protocols
- Synthetic spike-in standards for RNA-seq experiments
- (2011) L. Jiang et al. GENOME RESEARCH
- Integrity of the network sarcoplasmic reticulum in skeletal muscle requires small ankyrin 1
- (2011) M. A. Ackermann et al. JOURNAL OF CELL SCIENCE
- Nuclear Receptors TR2 and TR4 Recruit Multiple Epigenetic Transcriptional Corepressors That Associate Specifically with the Embryonic -Type Globin Promoters in Differentiated Adult Erythroid Cells
- (2011) S. Cui et al. MOLECULAR AND CELLULAR BIOLOGY
- Mapping and analysis of chromatin state dynamics in nine human cell types
- (2011) Jason Ernst et al. NATURE
- REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
- (2011) Fran Supek et al. PLoS One
- Statistical Modeling of RNA-Seq Data
- (2011) Julia Salzman et al. STATISTICAL SCIENCE
- Comparative Epigenomic Analysis of Murine and Human Adipogenesis
- (2010) Tarjei S. Mikkelsen et al. CELL
- Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data
- (2010) R. Pique-Regi et al. GENOME RESEARCH
- Diet, fitness and metabolic syndrome – The DR’s EXTRA Study
- (2010) R. Kouki et al. NUTRITION METABOLISM AND CARDIOVASCULAR DISEASES
- A Bayesian Framework to Account for Complex Non-Genetic Factors in Gene Expression Levels Greatly Increases Power in eQTL Studies
- (2010) Oliver Stegle et al. PLoS Computational Biology
- Fast and accurate short read alignment with Burrows-Wheeler transform
- (2009) H. Li et al. BIOINFORMATICS
- Association of 18 Confirmed Susceptibility Loci for Type 2 Diabetes With Indices of Insulin Release, Proinsulin Conversion, and Insulin Sensitivity in 5,327 Nondiabetic Finnish Men
- (2009) A. Stancakova et al. DIABETES
- Long-Range LD Can Confound Genome Scans in Admixed Populations
- (2008) Alkes L. Price et al. AMERICAN JOURNAL OF HUMAN GENETICS
- The Insulator Binding Protein CTCF Positions 20 Nucleosomes around Its Binding Sites across the Human Genome
- (2008) Yutao Fu et al. PLoS Genetics
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