Evolutionary interplay between sister cytochrome P450 genes shapes plasticity in plant metabolism

Evolution of the Telomere-Associated Protein POT1a in Arabidopsis thaliana Is Characterized by Positive Selection to Reinforce Protein–Protein Interaction

(2015) Mark A. Beilstein et al.   MOLECULAR BIOLOGY AND EVOLUTION

Flavonoids and the regulation of seed size inArabidopsis

(2014) James Doughty et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Protein moonlighting: a new factor in biology and medicine

(2014) Brian Henderson et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

An evolutionary perspective on protein moonlighting

(2014) Shelley D. Copley   BIOCHEMICAL SOCIETY TRANSACTIONS

Flavonoids as Important Molecules of Plant Interactions with the Environment

(2014) Justyna Mierziak et al.   MOLECULES

ABORTED MICROSPORES Acts as a Master Regulator of Pollen Wall Formation in Arabidopsis

(2014) J. Xu et al.   PLANT CELL

Geraniol hydroxylase and hydroxygeraniol oxidase activities of the CYP76 family of cytochrome P450 enzymes and potential for engineering the early steps of the (seco)iridoid pathway

(2013) René Höfer et al.   METABOLIC ENGINEERING

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Tarenaya hassleriana Genome Provides Insight into Reproductive Trait and Genome Evolution of Crucifers

(2013) S. Cheng et al.   PLANT CELL

Comprehensive developmental profiles of gene activity in regions and subregions of the Arabidopsis seed

(2013) M. F. Belmonte et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Quantum mechanically derived AMBER-compatible heme parameters for various states of the cytochrome P450 catalytic cycle

(2011) Kiumars Shahrokh et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Flavonoids: New Roles for Old Molecules

(2010) Charles S. Buer et al.   Journal of Integrative Plant Biology

Toward genome-wide metabolotyping and elucidation of metabolic system: metabolic profiling of large-scale bioresources

(2010) Masami Yokota Hirai et al.   JOURNAL OF PLANT RESEARCH

The evolution of gene duplications: classifying and distinguishing between models

(2010) Hideki Innan et al.   NATURE REVIEWS GENETICS

The origin and evolution of lignin biosynthesis

(2010) Jing-Ke Weng et al.   NEW PHYTOLOGIST

Over-expression of F5H in COMT-deficient Arabidopsis leads to enrichment of an unusual lignin and disruption of pollen wall formation

(2010) Jing-Ke Weng et al.   PLANT JOURNAL

Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana

(2010) M. A. Beilstein et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolution of an antifreeze protein by neofunctionalization under escape from adaptive conflict

(2010) C. Deng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

An archived activation tagged population of Arabidopsis thaliana to facilitate forward genetics approaches

(2009) Stephen J Robinson et al.   BMC PLANT BIOLOGY

AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

(2009) Garrett M. Morris et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

QMEAN server for protein model quality estimation

(2009) Pascal Benkert et al.   NUCLEIC ACIDS RESEARCH

AtMetExpress Development: A Phytochemical Atlas of Arabidopsis Development

(2009) F. Matsuda et al.   PLANT PHYSIOLOGY

Evolution of a Novel Phenolic Pathway for Pollen Development

(2009) M. Matsuno et al.   SCIENCE

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)

(2008) Ray Ming et al.   NATURE

How to usefully compare homologous plant genes and chromosomes as DNA sequences

(2008) Eric Lyons et al.   PLANT JOURNAL

QMEAN: A comprehensive scoring function for model quality assessment

(2007) Pascal Benkert et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS