Genomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environment

Nanoarchaeota, Their Sulfolobales Host, and Nanoarchaeota Virus Distribution across Yellowstone National Park Hot Springs

(2015) Jacob H. Munson-McGee et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Genomic Expansion of Domain Archaea Highlights Roles for Organisms from New Phyla in Anaerobic Carbon Cycling

(2015) Cindy J. Castelle et al.   CURRENT BIOLOGY

Structural Basis for a Unique ATP Synthase Core Complex fromNanoarcheaum equitans

(2015) Soumya Mohanty et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Unusual biology across a group comprising more than 15% of domain Bacteria

(2015) Christopher T. Brown et al.   NATURE

Diverse uncultivated ultra-small bacterial cells in groundwater

(2015) Birgit Luef et al.   Nature Communications

The universal tree of life: an update

(2015) Patrick Forterre   Frontiers in Microbiology

Evaluation and validation of de novo and hybrid assembly techniques to derive high-quality genome sequences

(2014) Sagar M. Utturkar et al.   BIOINFORMATICS

Rooting the Domain Archaea by Phylogenomic Analysis Supports the Foundation of the New Kingdom Proteoarchaeota

(2014) Céline Petitjean et al.   Genome Biology and Evolution

Life on the edge: functional genomic response of Ignicoccus hospitalis to the presence of Nanoarchaeum equitans

(2014) Richard J Giannone et al.   ISME Journal

Carbohydrate Metabolism in Archaea: Current Insights into Unusual Enzymes and Pathways and Their Regulation

(2014) C. Brasen et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle

(2014) Xuesong He et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface

(2014) Alexander J. Probst et al.   Nature Communications

Involvement of Intermediate Sulfur Species in Biological Reduction of Elemental Sulfur under Acidic, Hydrothermal Conditions

(2013) Eric S. Boyd et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities

(2013) Z. J. Jay et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park

(2013) Mircea Podar et al.   Biology Direct

Comparative metagenomic and rRNA microbial diversity characterization using archaeal and bacterial synthetic communities

(2013) Migun Shakya et al.   ENVIRONMENTAL MICROBIOLOGY

Small, Smaller, Smallest: The Origins and Evolution of Ancient Dual Symbioses in a Phloem-Feeding Insect

(2013) Gordon M. Bennett et al.   Genome Biology and Evolution

Insights into the phylogeny and coding potential of microbial dark matter

(2013) Christian Rinke et al.   NATURE

Extreme sweetness: protein glycosylation in archaea

(2013) Jerry Eichler   NATURE REVIEWS MICROBIOLOGY

Yellowstone Lake Nanoarchaeota

(2013) Scott Clingenpeel et al.   Frontiers in Microbiology

Genomic and evolutionary aspects of phytoplasmas

(2013) Kenro Oshima et al.   Frontiers in Microbiology

DanteR: an extensible R-based tool for quantitative analysis of -omics data

(2012) Tom Taverner et al.   BIOINFORMATICS

Updated clusters of orthologous genes for Archaea: a complex ancestor of the Archaea and the byways of horizontal gene transfer

(2012) Yuri I Wolf et al.   Biology Direct

Inter-field variability in the microbial communities of hydrothermal vent deposits from a back-arc basin

(2012) G. E. FLORES et al.   Geobiology

Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla

(2012) K. C. Wrighton et al.   SCIENCE

Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge

(2011) Gilberto E. Flores et al.   ENVIRONMENTAL MICROBIOLOGY

Proteomic Characterization of Cellular and Molecular Processes that Enable the Nanoarchaeum equitans-Ignicoccus hospitalis Relationship

(2011) Richard J. Giannone et al.   PLoS One

Directed Culturing of Microorganisms Using Metatranscriptomics

(2011) L. Bomar et al.   mBio

The Genome Sequence of the Crenarchaeon Acidilobus saccharovorans Supports a New Order, Acidilobales, and Suggests an Important Ecological Role in Terrestrial Acidic Hot Springs

(2010) A. V. Mardanov et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Histone and TK0471/TrmBL2 form a novel heterogeneous genome architecture in the hyperthermophilic archaeon Thermococcus kodakarensis

(2010) Hugo Maruyama et al.   MOLECULAR BIOLOGY OF THE CELL

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Isolation of the anaerobic thermoacidophilic crenarchaeote Acidilobus saccharovorans sp. nov. and proposal of Acidilobales ord. nov., including Acidilobaceae fam. nov. and Caldisphaeraceae fam. nov.

(2009) M. I. Prokofeva et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

IDPicker 2.0: Improved Protein Assembly with High Discrimination Peptide Identification Filtering

(2009) Ze-Qiang Ma et al.   JOURNAL OF PROTEOME RESEARCH

Ignicoccus hospitalis and Nanoarchaeum equitans: ultrastructure, cell–cell interaction, and 3D reconstruction from serial sections of freeze-substituted cells and by electron cryotomography

(2008) Benjamin Junglas et al.   ARCHIVES OF MICROBIOLOGY

Nanoarchaeal 16S rRNA gene sequences are widely dispersed in hyperthermophilic and mesophilic halophilic environments

(2008) Ana Casanueva et al.   EXTREMOPHILES

Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics

(2008) A. Pernthaler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans

(2008) Mircea Podar et al.   GENOME BIOLOGY