标题
Genome-wide compendium and functional assessment of in vivo heart enhancers
作者
关键词
-
出版物
Nature Communications
Volume 7, Issue -, Pages 12923
出版商
Springer Nature
发表日期
2016-10-05
DOI
10.1038/ncomms12923
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- CCSI: a database providing chromatin–chromatin spatial interaction information
- (2016) Xiaowei Xie et al. Database-The Journal of Biological Databases and Curation
- Using combined evidence from replicates to evaluate ChIP-seq peaks
- (2015) Vahid Jalili et al. BIOINFORMATICS
- Endothelin signaling activates Mef2c expression in the neural crest through a MEF2C-dependent positive-feedback transcriptional pathway
- (2015) J. Hu et al. DEVELOPMENT
- Mutations in a TGF-β Ligand, TGFB3, Cause Syndromic Aortic Aneurysms and Dissections
- (2015) Aida M. Bertoli-Avella et al. JOURNAL OF THE AMERICAN COLLEGE OF CARDIOLOGY
- Genetic predisposition to neuroblastoma mediated by a LMO1 super-enhancer polymorphism
- (2015) Derek A. Oldridge et al. NATURE
- Integrative analysis of 111 reference human epigenomes
- (2015) Anshul Kundaje et al. NATURE
- EMERGE: a flexible modelling framework to predict genomic regulatory elements from genomic signatures
- (2015) Karel van Duijvenboden et al. NUCLEIC ACIDS RESEARCH
- Occupancy by key transcription factors is a more accurate predictor of enhancer activity than histone modifications or chromatin accessibility
- (2015) Nergiz Dogan et al. Epigenetics & Chromatin
- HTSeq--a Python framework to work with high-throughput sequencing data
- (2014) S. Anders et al. BIOINFORMATICS
- A comparative encyclopedia of DNA elements in the mouse genome
- (2014) Feng Yue et al. NATURE
- Genome sequencing identifies major causes of severe intellectual disability
- (2014) Christian Gilissen et al. NATURE
- Function-based identification of mammalian enhancers using site-specific integration
- (2014) Diane E Dickel et al. NATURE METHODS
- The Mouse Genome Database (MGD): facilitating mouse as a model for human biology and disease
- (2014) Janan T. Eppig et al. NUCLEIC ACIDS RESEARCH
- The UCSC Genome Browser database: 2015 update
- (2014) Kate R. Rosenbloom et al. NUCLEIC ACIDS RESEARCH
- The MedSeq Project: a randomized trial of integrating whole genome sequencing into clinical medicine
- (2014) Jason L Vassy et al. Trials
- Integrating Diverse Datasets Improves Developmental Enhancer Prediction
- (2014) Genevieve D. Erwin et al. PLoS Computational Biology
- Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes
- (2013) Warren A. Whyte et al. CELL
- Rapid and Pervasive Changes in Genome-wide Enhancer Usage during Mammalian Development
- (2013) Alex S. Nord et al. CELL
- The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb
- (2013) Justin Cotney et al. CELL
- Genetics and Genomics for the Prevention and Treatment of Cardiovascular Disease: Update
- (2013) Santhi K. Ganesh et al. CIRCULATION
- The Human Phenotype Ontology project: linking molecular biology and disease through phenotype data
- (2013) Sebastian Köhler et al. NUCLEIC ACIDS RESEARCH
- The NHGRI GWAS Catalog, a curated resource of SNP-trait associations
- (2013) Danielle Welter et al. NUCLEIC ACIDS RESEARCH
- Fine Tuning of Craniofacial Morphology by Distant-Acting Enhancers
- (2013) C. Attanasio et al. SCIENCE
- An Erythroid Enhancer of BCL11A Subject to Genetic Variation Determines Fetal Hemoglobin Level
- (2013) D. E. Bauer et al. SCIENCE
- BEDOPS: high-performance genomic feature operations
- (2012) Shane Neph et al. BIOINFORMATICS
- Chromatin state signatures associated with tissue-specific gene expression and enhancer activity in the embryonic limb
- (2012) Justin Cotney et al. GENOME RESEARCH
- GENCODE: The reference human genome annotation for The ENCODE Project
- (2012) J. Harrow et al. GENOME RESEARCH
- Genetic variation in T-box binding element functionally affects SCN5A/SCN10A enhancer
- (2012) Malou van den Boogaard et al. JOURNAL OF CLINICAL INVESTIGATION
- A map of the cis-regulatory sequences in the mouse genome
- (2012) Yin Shen et al. NATURE
- Meta-analysis identifies six new susceptibility loci for atrial fibrillation
- (2012) Patrick T Ellinor et al. NATURE GENETICS
- NIH Image to ImageJ: 25 years of image analysis
- (2012) Caroline A Schneider et al. NATURE METHODS
- NCBI GEO: archive for functional genomics data sets—update
- (2012) Tanya Barrett et al. NUCLEIC ACIDS RESEARCH
- A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity
- (2012) M. Jinek et al. SCIENCE
- Systematic Localization of Common Disease-Associated Variation in Regulatory DNA
- (2012) M. T. Maurano et al. SCIENCE
- ETS-dependent regulation of a distal Gata4 cardiac enhancer
- (2011) William Schachterle et al. DEVELOPMENTAL BIOLOGY
- Large-scale discovery of enhancers from human heart tissue
- (2011) Dalit May et al. NATURE GENETICS
- Large-scale association analysis identifies 13 new susceptibility loci for coronary artery disease
- (2011) Heribert Schunkert et al. NATURE GENETICS
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Genome-wide association analysis identifies multiple loci related to resting heart rate
- (2010) M. Eijgelsheim et al. HUMAN MOLECULAR GENETICS
- Simple Combinations of Lineage-Determining Transcription Factors Prime cis-Regulatory Elements Required for Macrophage and B Cell Identities
- (2010) Sven Heinz et al. MOLECULAR CELL
- GREAT improves functional interpretation of cis-regulatory regions
- (2010) Cory Y McLean et al. NATURE BIOTECHNOLOGY
- Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
- (2010) Cole Trapnell et al. NATURE BIOTECHNOLOGY
- ChIP-Seq identification of weakly conserved heart enhancers
- (2010) Matthew J Blow et al. NATURE GENETICS
- The Sequence Read Archive
- (2010) R. Leinonen et al. NUCLEIC ACIDS RESEARCH
- TopHat: discovering splice junctions with RNA-Seq
- (2009) Cole Trapnell et al. BIOINFORMATICS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Genetic Evaluation of Cardiomyopathy—A Heart Failure Society of America Practice Guideline
- (2009) Ray E. Hershberger et al. JOURNAL OF CARDIAC FAILURE
- Beneficial effects of soluble epoxide hydrolase inhibitors in myocardial infarction model: Insight gained using metabolomic approaches
- (2009) Ning Li et al. JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY
- Histone modifications at human enhancers reflect global cell-type-specific gene expression
- (2009) Nathaniel D. Heintzman et al. NATURE
- ChIP-seq accurately predicts tissue-specific activity of enhancers
- (2009) Axel Visel et al. NATURE
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
- (2009) Ben Langmead et al. GENOME BIOLOGY
- Methods for Detecting Associations with Rare Variants for Common Diseases: Application to Analysis of Sequence Data
- (2008) Bingshan Li et al. AMERICAN JOURNAL OF HUMAN GENETICS
- SNAP: a web-based tool for identification and annotation of proxy SNPs using HapMap
- (2008) A. D. Johnson et al. BIOINFORMATICS
- Combinatorial patterns of histone acetylations and methylations in the human genome
- (2008) Zhibin Wang et al. NATURE GENETICS
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
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