Genome-wide association study of 12 agronomic traits in peach

Whole genome sequences are required to fully resolve the linkage disequilibrium structure of human populations

(2015) Reuben J. Pengelly et al.   BMC GENOMICS

Genetic dissection of fruit weight and size in an F2 peach (Prunus persica (L.) Batsch) progeny

(2015) Cássia da Silva Linge et al.   MOLECULAR BREEDING

Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean

(2015) Zhengkui Zhou et al.   NATURE BIOTECHNOLOGY

Whole-Genome Analysis of Diversity and SNP-Major Gene Association in Peach Germplasm

(2015) Diego Micheletti et al.   PLoS One

Novel Methods to Optimize Genotypic Imputation for Low-Coverage, Next-Generation Sequence Data in Crop Plants

(2015) Kelly Swarts et al.   Plant Genome

Genomic analyses provide insights into the history of tomato breeding

(2014) Tao Lin et al.   NATURE GENETICS

A Unique Mutation in a MYB Gene Cosegregates with the Nectarine Phenotype in Peach

(2014) Elisa Vendramin et al.   PLoS One

Biosynthesis, regulation, and domestication of bitterness in cucumber

(2014) Y. Shang et al.   SCIENCE

The complex jujube genome provides insights into fruit tree biology

(2014) Meng-Jun Liu et al.   Nature Communications

Natural Variations and Genome-Wide Association Studies in Crop Plants

(2013) Xuehui Huang et al.   Annual Review of Plant Biology

The high-quality draft genome of peach (Prunus persica) identifies unique patterns of genetic diversity, domestication and genome evolution

(2013) Ignazio Verde et al.   NATURE GENETICS

A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica)

(2013) Guanqing Jia et al.   NATURE GENETICS

The advantages and limitations of trait analysis with GWAS: a review

(2013) Arthur Korte et al.   Plant Methods

Association mapping in forest trees and fruit crops

(2012) M. A. Khan et al.   JOURNAL OF EXPERIMENTAL BOTANY

A map of rice genome variation reveals the origin of cultivated rice

(2012) Xuehui Huang et al.   NATURE

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels

(2012) Hui Li et al.   NATURE GENETICS

High density SNP mapping and QTL analysis for fruit quality characteristics in peach (Prunus persica L.)

(2012) Pedro J. Martínez-García et al.   Tree Genetics & Genomes

Differences in acidity of apples are probably mainly caused by a malic acid transporter gene on LG16

(2012) Sabaz Ali Khan et al.   Tree Genetics & Genomes

The peach genome

(2012) Pere Arús et al.   Tree Genetics & Genomes

The genome of Prunus mume

(2012) Qixiang Zhang et al.   Nature Communications

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

An R2R3 MYB transcription factor associated with regulation of the anthocyanin biosynthetic pathway in Rosaceae

(2010) Kui Lin-Wang et al.   BMC PLANT BIOLOGY

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Molecular Architecture of the Human Prp19/CDC5L Complex

(2010) M. Grote et al.   MOLECULAR AND CELLULAR BIOLOGY

Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines

(2010) Susanna Atwell et al.   NATURE

Genome-wide association studies of 14 agronomic traits in rice landraces

(2010) Xuehui Huang et al.   NATURE GENETICS

Simultaneous Genotype Calling and Haplotype Phasing Improves Genotype Accuracy and Reduces False-Positive Associations for Genome-wide Association Studies

(2009) Brian L. Browning et al.   AMERICAN JOURNAL OF HUMAN GENETICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Volatile characteristics of 50 peaches and nectarines evaluated by HP–SPME with GC–MS

(2009) Yiju Wang et al.   FOOD CHEMISTRY

A MYB transcription factor regulates anthocyanin biosynthesis in mangosteen (Garcinia mangostana L.) fruit during ripening

(2009) Yossapol Palapol et al.   PLANTA

Population, quantitative and comparative genomics of adaptation in forest trees

(2008) David B Neale et al.   CURRENT OPINION IN PLANT BIOLOGY

Transcriptome Analyses Show Changes in Gene Expression to Accompany Pollen Germination and Tube Growth in Arabidopsis

(2008) Y. Wang et al.   PLANT PHYSIOLOGY

Multiple Models for Rosaceae Genomics

(2008) V. Shulaev et al.   PLANT PHYSIOLOGY