Metagenomic evidence for the presence of phototrophic Gemmatimonadetes bacteria in diverse environments

Characterization of the microaerophilic, bacteriochlorophyll a-containing bacterium Gemmatimonas phototrophica sp. nov., and emended descriptions of the genus Gemmatimonas and Gemmatimonas aurantiaca

(2015) Yonghui Zeng et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

A RESTful API for Accessing Microbial Community Data for MG-RAST

(2015) Andreas Wilke et al.   PLoS Computational Biology

Three Novel Virophage Genomes Discovered from Yellowstone Lake Metagenomes

(2014) Jinglie Zhou et al.   JOURNAL OF VIROLOGY

Effect of Red Clay on Diesel Bioremediation and Soil Bacterial Community

(2014) Jaejoon Jung et al.   MICROBIAL ECOLOGY

Evidence of Carbon Fixation Pathway in a Bacterium from Candidate Phylum SBR1093 Revealed with Genomic Analysis

(2014) Zhiping Wang et al.   PLoS One

Functional type 2 photosynthetic reaction centers found in the rare bacterial phylum Gemmatimonadetes

(2014) Y. Zeng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distribution and Origin of Oxygen-Dependent and Oxygen-Independent Forms of Mg-Protoporphyrin Monomethylester Cyclase among Phototrophic Proteobacteria

(2013) Ekaterina N. Boldareva-Nuianzina et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gemmatirosa kalamazoonesis gen. nov., sp. nov., a member of the rarely-cultivated bacterial phylum Gemmatimonadetes

(2013) Jennifer M. DeBruyn et al.   JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

(2013) Mads Albertsen et al.   NATURE BIOTECHNOLOGY

Challenges in homology search: HMMER3 and convergent evolution of coiled-coil regions

(2013) Jaina Mistry et al.   NUCLEIC ACIDS RESEARCH

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

(2012) Andreas Wilke et al.   BMC BIOINFORMATICS

Dryland biological soil crust cyanobacteria show unexpected decreases in abundance under long-term elevated CO2

(2012) Blaire Steven et al.   ENVIRONMENTAL MICROBIOLOGY

Comparative Metagenomics of Toxic Freshwater Cyanobacteria Bloom Communities on Two Continents

(2012) Morgan M. Steffen et al.   PLoS One

Microbial oceanography of anoxic oxygen minimum zones

(2012) O. Ulloa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global Biogeography and Quantitative Seasonal Dynamics of Gemmatimonadetes in Soil

(2011) Jennifer M. DeBruyn et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Yellowstone Lake: high-energy geochemistry and rich bacterial diversity

(2011) Scott Clingenpeel et al.   ENVIRONMENTAL MICROBIOLOGY

Early Evolution of Photosynthesis

(2010) R. E. Blankenship   PLANT PHYSIOLOGY

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS