The impact of anchored phylogenomics and taxon sampling on phylogenetic inference in narrow-mouthed frogs (Anura, Microhylidae)

Beautiful bright belly: A distinctive new microhylid frog (Amphibia: Stumpffia) from eastern Madagascar

(2015) Frank Glaw et al.   ZOOTAXA

DNA barcoding Madagascar’s amphibian fauna

(2014) R.G. Bina Perl et al.   AMPHIBIA-REPTILIA

Phylogeny, Taxonomic Revision, and Character Evolution of the GeneraChiasmocleisandSyncope(Anura, Microhylidae) in Amazonia, with Descriptions of Three New Species

(2014) Pedro L.V. Peloso et al.   BULLETIN OF THE AMERICAN MUSEUM OF NATURAL HISTORY

POY version 5: phylogenetic analysis using dynamic homologies under multiple optimality criteria

(2014) Ward C. Wheeler et al.   CLADISTICS

Red Hot Chili Pepper. A New Calluella Stoliczka, 1872 (Lissamphibia: Anura: Microhylidae) from Sarawak, East Malaysia (Borneo)

(2014) INDRANEIL DAS et al.   ZOOTAXA

Molecular systematics of terraranas (Anura: Brachycephaloidea) with an assessment of the effects of alignment and optimality criteria

(2014) JOSÉ M. PADIAL et al.   ZOOTAXA

AN ADAPTIVE RADIATION OF FROGS IN A SOUTHEAST ASIAN ISLAND ARCHIPELAGO

(2013) David C. Blackburn et al.   EVOLUTION

An artifact caused by undersampling optimal trees in supermatrix analyses of locally sampled characters

(2013) Mark P. Simmons et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Molecular phylogeny of microhylid frogs (Anura: Microhylidae) with emphasis on relationships among New World genera

(2012) Rafael O de Sá et al.   BMC EVOLUTIONARY BIOLOGY

Indel information eliminates trivial sequence alignment in maximum likelihood phylogenetic analysis

(2012) John S.S. Denton et al.   CLADISTICS

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ecological Guild Evolution and the Discovery of the World's Smallest Vertebrate

(2012) Eric N. Rittmeyer et al.   PLoS One

Anchored Hybrid Enrichment for Massively High-Throughput Phylogenomics

(2012) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Ultraconserved Elements Anchor Thousands of Genetic Markers Spanning Multiple Evolutionary Timescales

(2012) Brant C. Faircloth et al.   SYSTEMATIC BIOLOGY

Misleading results of likelihood-based phylogenetic analyses in the presence of missing data

(2011) Mark P. Simmons   CLADISTICS

Ultraconserved elements are novel phylogenomic markers that resolve placental mammal phylogeny when combined with species-tree analysis

(2011) J. E. McCormack et al.   GENOME RESEARCH

A large-scale phylogeny of Amphibia including over 2800 species, and a revised classification of extant frogs, salamanders, and caecilians

(2011) R. Alexander Pyron et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Systematic relationships of Oriental tiny frogs of the family Microhylidae (Amphibia, Anura) as revealed by mtDNA genealogy

(2011) Masafumi Matsui et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Radical instability and spurious branch support by likelihood when applied to matrices with non-random distributions of missing data

(2011) Mark P. Simmons   MOLECULAR PHYLOGENETICS AND EVOLUTION

Biologically Inspired Phylogenetic Models Strongly Outperform the No Common Mechanism Model

(2011) John P. Huelsenbeck et al.   SYSTEMATIC BIOLOGY

Missing Data in Phylogenetic Analysis: Reconciling Results from Simulations and Empirical Data

(2011) John J. Wiens et al.   SYSTEMATIC BIOLOGY

SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information

(2010) Gaurav Vaidya et al.   CLADISTICS

POY version 4: phylogenetic analysis using dynamic homologies

(2009) Andrés Varón et al.   CLADISTICS

Effects of data incompleteness on the relative performance of parsimony and Bayesian approaches in a supermatrix phylogenetic reconstruction of Mustelidae and Procyonidae (Carnivora)

(2009) Mieczyslaw Wolsan et al.   CLADISTICS

The Effect of Ambiguous Data on Phylogenetic Estimates Obtained by Maximum Likelihood and Bayesian Inference

(2009) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Perspective: Parsimony, explanatory power, and dynamic homology testing

(2009) Taran Grant et al.   SYSTEMATICS AND BIODIVERSITY

TNT, a free program for phylogenetic analysis

(2008) Pablo A. Goloboff et al.   CLADISTICS

PATTERNS OF ENDEMISM AND SPECIES RICHNESS IN MALAGASY COPHYLINE FROGS SUPPORT A KEY ROLE OF MOUNTAINOUS AREAS FOR SPECIATION

(2008) Katharina C. Wollenberg et al.   EVOLUTION

The radiation of microhylid frogs (Amphibia: Anura) on New Guinea: A mitochondrial phylogeny reveals parallel evolution of morphological and life history traits and disproves the current morphology-based classification

(2007) Frank Köhler et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION