Dynamic metabolic and transcriptomic profiling of methyl jasmonate-treated hairy roots reveals synthetic characters and regulators of lignan biosynthesis inIsatis indigoticaFort

Lariciresinol-4-O-β-D-glucopyranoside from the root of Isatis indigotica inhibits influenza A virus-induced pro-inflammatory response

(2015) Jing Li et al.   JOURNAL OF ETHNOPHARMACOLOGY

Combined transcriptome and metabolite profiling reveals thatIiPLR1 plays an important role in lariciresinol accumulation inIsatis indigotica

(2015) Ying Xiao et al.   JOURNAL OF EXPERIMENTAL BOTANY

It Is Easy to Get Huge Candidate Gene Lists for Plant Metabolism Now, but How to Get Beyond?

(2015) Alain Goossens   Molecular Plant

Cloning and functional characterization of a 4-coumarate CoA ligase from liverwort Plagiochasma appendiculatum

(2015) Shuai Gao et al.   PHYTOCHEMISTRY

Indole Glucosinolate Biosynthesis Limits Phenylpropanoid Accumulation inArabidopsis thaliana

(2015) Jeong Im Kim et al.   PLANT CELL

Transcriptomic Analysis Reveals Differential Gene Expressions for Cell Growth and Functional Secondary Metabolites in Induced Autotetraploid of Chinese Woad (Isatis indigotica Fort.)

(2015) Yingying Zhou et al.   PLoS One

Histidine 352 (His352) and Tryptophan 355 (Trp355) Are Essential for Flax UGT74S1 Glucosylation Activity toward Secoisolariciresinol

(2015) Kaushik Ghose et al.   PLoS One

Identification and functional characterization of a flax UDP-glycosyltransferase glucosylating secoisolariciresinol (SECO) into secoisolariciresinol monoglucoside (SMG) and diglucoside (SDG)

(2014) Kaushik Ghose et al.   BMC PLANT BIOLOGY

Molecular Reprogramming of Arabidopsis in Response to Perturbation of Jasmonate Signaling

(2014) Huizhuan Yan et al.   JOURNAL OF PROTEOME RESEARCH

Transcriptional data mining ofSalvia miltiorrhizain response to methyl jasmonate to examine the mechanism of bioactive compound biosynthesis and regulation

(2014) Hongmei Luo et al.   PHYSIOLOGIA PLANTARUM

Cuticular Wax Biosynthesis is Up-Regulated by the MYB94 Transcription Factor in Arabidopsis

(2014) Saet Buyl Lee et al.   PLANT AND CELL PHYSIOLOGY

Structural Studies of Cinnamoyl-CoA Reductase and Cinnamyl-Alcohol Dehydrogenase, Key Enzymes of Monolignol Biosynthesis

(2014) H. Pan et al.   PLANT CELL

Transcriptome Analysis of Catharanthus roseus for Gene Discovery and Expression Profiling

(2014) Mohit Verma et al.   PLoS One

High-Throughput Sequencing and De Novo Assembly of the Isatis indigotica Transcriptome

(2014) Xiaoqing Tang et al.   PLoS One

Natural products - modifying metabolite pathways in plants

(2013) Agata Staniek et al.   Biotechnology Journal

Biosynthesis of the active compounds of Isatis indigotica based on transcriptome sequencing and metabolites profiling

(2013) Junfeng Chen et al.   BMC GENOMICS

Network analysis for gene discovery in plant-specialized metabolism

(2013) YASUHIRO HIGASHI et al.   PLANT CELL AND ENVIRONMENT

Metabolomics Analysis and Biosynthesis of Rosmarinic Acid in Agastache rugosa Kuntze Treated with Methyl Jasmonate

(2013) Yeon Bok Kim et al.   PLoS One

Deep Sequencing Reveals Transcriptome Re-Programming of Taxus × media Cells to the Elicitation with Methyl Jasmonate

(2013) Guiling Sun et al.   PLoS One

MYC2: The Master in Action

(2012) Kemal Kazan et al.   Molecular Plant

Auxin ControlsArabidopsisAdventitious Root Initiation by Regulating Jasmonic Acid Homeostasis

(2012) Laurent Gutierrez et al.   PLANT CELL

MEDIATOR25 Acts as an Integrative Hub for the Regulation of Jasmonate-Responsive Gene Expression in Arabidopsis

(2012) V. Cevik et al.   PLANT PHYSIOLOGY

TheArabidopsisbHLH Transcription Factors MYC3 and MYC4 Are Targets of JAZ Repressors and Act Additively with MYC2 in the Activation of Jasmonate Responses

(2011) Patricia Fernández-Calvo et al.   PLANT CELL

Transcriptional networks for lignin biosynthesis: more complex than we thought?

(2011) Qiao Zhao et al.   TRENDS IN PLANT SCIENCE

Partitioning of New Carbon as 11C in Nicotiana tabacum Reveals Insight into Methyl Jasmonate Induced Changes in Metabolism

(2010) Nils Hanik et al.   JOURNAL OF CHEMICAL ECOLOGY

Metabolomics for plant stress response

(2010) Vladimir Shulaev et al.   PHYSIOLOGIA PLANTARUM

Crystal Structures of aPopulus tomentosa4-Coumarate:CoA Ligase Shed Light on Its Enzymatic Mechanisms

(2010) Yonglin Hu et al.   PLANT CELL

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Metabolomics for Functional Genomics, Systems Biology, and Biotechnology

(2009) Kazuki Saito et al.   Annual Review of Plant Biology

Mapping methyl jasmonate-mediated transcriptional reprogramming of metabolism and cell cycle progression in cultured Arabidopsis cells

(2008) L. Pauwels et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Decoding genes with coexpression networks and metabolomics – ‘majority report by precogs’

(2007) Kazuki Saito et al.   TRENDS IN PLANT SCIENCE