Domestication and the storage starch biosynthesis pathway: signatures of selection from a whole sorghum genome sequencing strategy

The origin and evolution of maize in the Southwestern United States

(2015) Rute R. da Fonseca et al.   Nature Plants

The plasticity of NBS resistance genes in sorghum is driven by multiple evolutionary processes

(2014) Emma Mace et al.   BMC PLANT BIOLOGY

PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R

(2014) Bastian Pfeifer et al.   MOLECULAR BIOLOGY AND EVOLUTION

MOROKOSHI: Transcriptome Database in Sorghum bicolor

(2014) Yuko Makita et al.   PLANT AND CELL PHYSIOLOGY

Improving starch yield in cereals by over-expression of ADPglucose pyrophosphorylase: Expectations and unanticipated outcomes

(2013) Aytug Tuncel et al.   PLANT SCIENCE

Allelic variation at a single gene increases food value in a drought-tolerant staple cereal

(2013) Edward K. Gilding et al.   Nature Communications

Whole-genome sequencing reveals untapped genetic potential in Africa’s indigenous cereal crop sorghum

(2013) Emma S. Mace et al.   Nature Communications

Divergent Evolutionary Pattern of Starch Biosynthetic Pathway Genes in Grasses and Dicots

(2012) Chun Li et al.   MOLECULAR BIOLOGY AND EVOLUTION

A map of rice genome variation reveals the origin of cultivated rice

(2012) Xuehui Huang et al.   NATURE

Comparative population genomics of maize domestication and improvement

(2012) Matthew B Hufford et al.   NATURE GENETICS

Genome-wide genetic changes during modern breeding of maize

(2012) Yinping Jiao et al.   NATURE GENETICS

Differential Selection on Carotenoid Biosynthesis Genes as a Function of Gene Position in the Metabolic Pathway: A Study on the Carrot and Dicots

(2012) Jérémy Clotault et al.   PLoS One

Population genomic and genome-wide association studies of agroclimatic traits in sorghum

(2012) G. P. Morris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genomic Determinants of Protein Evolution and Polymorphism in Arabidopsis

(2011) Tanja Slotte et al.   Genome Biology and Evolution

Resequencing 50 accessions of cultivated and wild rice yields markers for identifying agronomically important genes

(2011) Xun Xu et al.   NATURE BIOTECHNOLOGY

Lack of Low Frequency Variants Masks Patterns of Non-Neutral Evolution following Domestication

(2011) Céline H. Frère et al.   PLoS One

Genetic diversity, structure, gene flow and evolutionary relationships within the Sorghum bicolor wild–weedy–crop complex in a western African region

(2011) Fabrice Sagnard et al.   THEORETICAL AND APPLIED GENETICS

Two Evolutionary Histories in the Genome of Rice: the Roles of Domestication Genes

(2011) Ziwen He et al.   PLoS Genetics

Starch: Its Metabolism, Evolution, and Biotechnological Modification in Plants

(2010) Samuel C. Zeeman et al.   Annual Review of Plant Biology

Molecular Evolution of the Endosperm Starch Synthesis Pathway Genes in Rice (Oryza sativa L.) and Its Wild Ancestor, O. rufipogon L.

(2010) G. Yu et al.   MOLECULAR BIOLOGY AND EVOLUTION

Starch biosynthesis in developing seeds

(2010) Ian J. Tetlow   SEED SCIENCE RESEARCH

Contrasted patterns of selection since maize domestication on duplicated genes encoding a starch pathway enzyme

(2010) J. Corbi et al.   THEORETICAL AND APPLIED GENETICS

Variability of grain quality in sorghum: association with polymorphism in Sh2, Bt2, SssI, Ae1, Wx and O2

(2010) L. F. de Alencar Figueiredo et al.   THEORETICAL AND APPLIED GENETICS

Starch phosphorylase: Role in starch metabolism and biotechnological applications

(2009) R.S. Rathore et al.   CRITICAL REVIEWS IN BIOTECHNOLOGY

Characterization of pullulanase (PUL)-deficient mutants of rice (Oryza sativa L.) and the function of PUL on starch biosynthesis in the developing rice endosperm

(2009) Naoko Fujita et al.   JOURNAL OF EXPERIMENTAL BOTANY

Patterns of Variation in the Evolution of Carotenoid Biosynthetic Pathway Enzymes of Higher Plants

(2009) Kevin Livingstone et al.   JOURNAL OF HEREDITY

The Correlation of Evolutionary Rate with Pathway Position in Plant Terpenoid Biosynthesis

(2009) Heather Ramsay et al.   MOLECULAR BIOLOGY AND EVOLUTION

UDP-Glucose Pyrophosphorylase is not Rate Limiting, but is Essential in Arabidopsis

(2009) M. Meng et al.   PLANT AND CELL PHYSIOLOGY

Phylogeographic Evidence of Crop Neodiversity in Sorghum

(2008) L. F. de Alencar Figueiredo et al.   GENETICS

Variation in Constraint Versus Positive Selection as an Explanation for Evolutionary Rate Variation Among Anthocyanin Genes

(2008) Mark D. Rausher et al.   JOURNAL OF MOLECULAR EVOLUTION

Diurnal oscillation of SBE expression in sorghum endosperm

(2008) Joel Mutisya et al.   JOURNAL OF PLANT PHYSIOLOGY

Mutation of the Plastidial  -Glucan Phosphorylase Gene in Rice Affects the Synthesis and Structure of Starch in the Endosperm

(2008) H. Satoh et al.   PLANT CELL

Inactivation of the UGPase1 gene causes genic male sterility and endosperm chalkiness in rice (Oryza sativa L.)

(2008) Mi-Ok Woo et al.   PLANT JOURNAL

Analysis of Protein Complexes in Wheat Amyloplasts Reveals Functional Interactions among Starch Biosynthetic Enzymes

(2008) I. J. Tetlow et al.   PLANT PHYSIOLOGY