Bacterial populations in juvenile maize rhizospheres originate from both seed and soil

Impacts of bulk soil microbial community structure on rhizosphere microbiomes of Zea mays

(2015) Matthew G. Bakker et al.   PLANT AND SOIL

Structure, variation, and assembly of the root-associated microbiomes of rice

(2015) Joseph Edwards et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Collaboration between grass seedlings and rhizobacteria to scavenge organic nitrogen in soils

(2015) James F. White et al.   AoB Plants

MT-Toolbox: improved amplicon sequencing using molecule tags

(2014) Scott M Yourstone et al.   BMC BIOINFORMATICS

Impact of swapping soils on the endophytic bacterial communities of pre-domesticated, ancient and modern maize

(2014) David Johnston-Monje et al.   BMC PLANT BIOLOGY

Maternal influences on fetal microbial colonization and immune development

(2014) Joann Romano-Keeler et al.   PEDIATRIC RESEARCH

Genome-wide association study of Arabidopsis thaliana leaf microbial community

(2014) Matthew W. Horton et al.   Nature Communications

Structure and Functions of the Bacterial Microbiota of Plants

(2013) Davide Bulgarelli et al.   Annual Review of Plant Biology

Rhizosphere microbiome assemblage is affected by plant development

(2013) Jacqueline M Chaparro et al.   ISME Journal

Practical innovations for high-throughput amplicon sequencing

(2013) Derek S Lundberg et al.   NATURE METHODS

Going back to the roots: the microbial ecology of the rhizosphere

(2013) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mom Knows Best: The Universality of Maternal Microbial Transmission

(2013) Lisa J. Funkhouser et al.   PLOS BIOLOGY

Vertical transmission explains the specific Burkholderia pattern in Sphagnum mosses at multi-geographic scale

(2013) Anastasia Bragina et al.   Frontiers in Microbiology

Investigation on diversity and population succession dynamics of endophytic bacteria from seeds of maize (Zea mays L., Nongda108) at different growth stages

(2012) Yang Liu et al.   ANNALS OF MICROBIOLOGY

Study on diversity of endophytic bacterial communities in seeds of hybrid maize and their parental lines

(2012) Yang Liu et al.   ARCHIVES OF MICROBIOLOGY

Defining the core Arabidopsis thaliana root microbiome

(2012) Derek S. Lundberg et al.   NATURE

Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota

(2012) Davide Bulgarelli et al.   NATURE

Changes in the population of seed bacteria of transgenerationally Cd-exposedArabidopsis thaliana

(2012) S. Truyens et al.   PLANT BIOLOGY

Dynamics of Seed-Borne Rice Endophytes on Early Plant Growth Stages

(2012) Pablo R. Hardoim et al.   PLoS One

Is diversification history of maize influencing selection of soil bacteria by roots?

(2011) MARIE-LARA BOUFFAUD et al.   MOLECULAR ECOLOGY

Conservation and Diversity of Seed Associated Endophytes in Zea across Boundaries of Evolution, Ethnography and Ecology

(2011) David Johnston-Monje et al.   PLoS One

Comparative Analysis of Bacterial Communities in a Potato Field as Determined by Pyrosequencing

(2011) Özgül İnceoğlu et al.   PLoS One

The under-recognized dominance of Verrucomicrobia in soil bacterial communities

(2011) Gaddy T. Bergmann et al.   SOIL BIOLOGY & BIOCHEMISTRY

Effects of Plant Genotype and Growth Stage on the Betaproteobacterial Communities Associated with Different Potato Cultivars in Two Fields

(2010) O. Inceoglu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns

(2010) M. G. Dominguez-Bello et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Endophytic bacteria in cacti seeds can improve the development of cactus seedlings

(2009) M. Esther Puente et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Search of environmental descriptors to explain the variability of the bacterial diversity from maize rhizospheres across a regional scale

(2009) Thelma Castellanos et al.   EUROPEAN JOURNAL OF SOIL BIOLOGY

Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere

(2009) Gabriele Berg et al.   FEMS MICROBIOLOGY ECOLOGY

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

(2009) M. Hamady et al.   GENOME RESEARCH

Polymerase chain reaction primers miss half of rRNA microbial diversity

(2009) SunHee Hong et al.   ISME Journal

Influence of Arabidopsis thaliana accessions on rhizobacterial communities and natural variation in root exudates

(2009) Shirley A. Micallef et al.   JOURNAL OF EXPERIMENTAL BOTANY

Rice Seeds as Sources of Endophytic Bacteria

(2009) Hiroko Kaga et al.   MICROBES AND ENVIRONMENTS

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

Critical Evaluation of Two Primers Commonly Used for Amplification of Bacterial 16S rRNA Genes

(2008) J. A. Frank et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Burkholderiaspp. are the most competitive symbionts ofMimosa, particularly under N-limited conditions

(2008) Geoffrey N. Elliott et al.   ENVIRONMENTAL MICROBIOLOGY

Effects of plant genotype and growth stage on the structure of bacterial communities associated with potato (Solanum tuberosum L.)

(2008) Leo Van Overbeek et al.   FEMS MICROBIOLOGY ECOLOGY

Diversity of endophytic bacteria fromEucalyptusspecies seeds and colonization of seedlings byPantoea agglomerans

(2008) Anderson Ferreira et al.   FEMS MICROBIOLOGY LETTERS

Phyllosphere microbiology with special reference to diversity and plant genotype

(2008) J.M. Whipps et al.   JOURNAL OF APPLIED MICROBIOLOGY

Analysis of T-RFLP data using analysis of variance and ordination methods: A comparative study

(2008) S.W. Culman et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Native Bacterial Endophytes Promote Host Growth in a Species-Specific Manner; Phytohormone Manipulations Do Not Result in Common Growth Responses

(2008) Hoang Hoa Long et al.   PLoS One