Learning from pseudo-labels: deep networks improve consistency in longitudinal brain volume estimation

Brain atrophy measurement over a MRI scanner change in multiple sclerosis

(2022) Tim Sinnecker et al.   NeuroImage-Clinical

Estimating the effect of a scanner upgrade on measures of grey matter structure for longitudinal designs

(2021) Evelyn Medawar et al.   PLoS One

FastSurfer - A fast and accurate deep learning based neuroimaging pipeline

(2020) Leonie Henschel et al.   NEUROIMAGE

Longitudinal ComBat: A method for harmonizing longitudinal multi-scanner imaging data

(2020) Joanne C. Beer et al.   NEUROIMAGE

Neuroharmony: A new tool for harmonizing volumetric MRI data from unseen scanners

(2020) Rafael Garcia-Dias et al.   NEUROIMAGE

DeepHarmony: A deep learning approach to contrast harmonization across scanner changes

(2019) Blake E. Dewey et al.   MAGNETIC RESONANCE IMAGING

Virtual Adversarial Training: A Regularization Method for Supervised and Semi-Supervised Learning

(2018) Takeru Miyato et al.   IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE

Improvement of image quality at CT and MRI using deep learning

(2018) Toru Higaki et al.   JAPANESE JOURNAL OF RADIOLOGY

Estimating and accounting for the effect of MRI scanner changes on longitudinal whole-brain volume change measurements

(2018) Hyunwoo Lee et al.   NEUROIMAGE

Regularizing Neural Networks via Retaining Confident Connections

(2017) Shengnan Zhang et al.   Entropy

Safety and efficacy of opicinumab in acute optic neuritis (RENEW): a randomised, placebo-controlled, phase 2 trial

(2017) Diego Cadavid et al.   LANCET NEUROLOGY

Neurological software tool for reliable atrophy measurement (NeuroSTREAM) of the lateral ventricles on clinical-quality T2-FLAIR MRI scans in multiple sclerosis

(2017) Michael G. Dwyer et al.   NeuroImage-Clinical

The first step for neuroimaging data analysis: DICOM to NIfTI conversion

(2016) Xiangrui Li et al.   JOURNAL OF NEUROSCIENCE METHODS

Reliable measurements of brain atrophy in individual patients with multiple sclerosis

(2016) Dirk Smeets et al.   Brain and Behavior

Defining reliable disability outcomes in multiple sclerosis

(2015) Tomas Kalincik et al.   BRAIN

Establishing pathological cut-offs of brain atrophy rates in multiple sclerosis

(2015) Nicola De Stefano et al.   JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY

Measuring brain atrophy with a generalized formulation of the boundary shift integral

(2015) Ferran Prados et al.   NEUROBIOLOGY OF AGING

Clinical Relevance of Brain Volume Measures in Multiple Sclerosis

(2014) Nicola De Stefano et al.   CNS DRUGS

Brain atrophy and disability progression in multiple sclerosis patients: a 10-year follow-up study

(2014) Cecilie Jacobsen et al.   JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY

Reliability of brain volume measurements: A test-retest dataset

(2014) Julian Maclaren et al.   Scientific Data

Brain atrophy and lesion load predict long term disability in multiple sclerosis

(2013) Veronica Popescu et al.   JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY

The Design of SimpleITK

(2013) Bradley C. Lowekamp et al.   Frontiers in Neuroinformatics

Jacobian integration method increases the statistical power to measure gray matter atrophy in multiple sclerosis

(2013) Kunio Nakamura et al.   NeuroImage-Clinical

Recommendations to improve imaging and analysis of brain lesion load and atrophy in longitudinal studies of multiple sclerosis

(2012) H. Vrenken et al.   JOURNAL OF NEUROLOGY

Within-subject template estimation for unbiased longitudinal image analysis

(2012) Martin Reuter et al.   NEUROIMAGE

FreeSurfer

(2012) Bruce Fischl   NEUROIMAGE

Bias Field Inconsistency Correction of Motion-Scattered Multislice MRI for Improved 3D Image Reconstruction

(2011) Kio Kim et al.   IEEE TRANSACTIONS ON MEDICAL IMAGING

Nonlinear registration of longitudinal images and measurement of change in regions of interest

(2011) Dominic Holland et al.   MEDICAL IMAGE ANALYSIS

Effects of gradient non-linearity correction and intensity non-uniformity correction in longitudinal studies using structural image evaluation using normalization of atrophy (SIENA)

(2010) Hidemasa Takao et al.   JOURNAL OF MAGNETIC RESONANCE IMAGING

The Alzheimer's disease neuroimaging initiative (ADNI): MRI methods

(2008) Clifford R. Jack et al.   JOURNAL OF MAGNETIC RESONANCE IMAGING