Complete mitochondrial genome of the abyssal coral Abyssoprimnoa gemina Cairns, 2015 (Octocorallia, Primnoidae) from the Clarion-Clipperton Zone, Pacific Ocean

Macrofauna-sized foraminifera in epibenthic sledge samples from five areas in the eastern Clarion-Clipperton Zone (equatorial Pacific)

(2023) Andrew J. Gooday et al.   Frontiers in Marine Science

How many metazoan species live in the world’s largest mineral exploration region?

(2023) Muriel Rabone et al.   CURRENT BIOLOGY

Biodiversity, biogeography, and connectivity of polychaetes in the world's largest marine minerals exploration frontier

(2023) Eva C. D. Stewart et al.   DIVERSITY AND DISTRIBUTIONS

A hybrid-capture approach to reconstruct the phylogeny of Scleractinia (Cnidaria: Hexacorallia)

(2023) Z.B. Randolph Quek et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Selection in coral mitogenomes, with insights into adaptations in the deep sea

(2023) Nina I. Ramos et al.   Scientific Reports

A review of megafauna diversity and abundance in an exploration area for polymetallic nodules in the eastern part of the Clarion Clipperton Fracture Zone (North East Pacific), and implications for potential future deep-sea mining in this area

(2023) Katja Uhlenkott et al.   Marine Biodiversity

Large dataset of octocoral mitochondrial genomes provides new insights into mt-mutS evolution and function

(2022) Viraj Muthye et al.   DNA REPAIR

Assessing plume impacts caused by polymetallic nodule mining vehicles

(2022) P.P.E. Weaver et al.   MARINE POLICY

Assessment of scientific gaps related to the effective environmental management of deep-seabed mining

(2022) Diva J. Amon et al.   MARINE POLICY

REE and Trace Elements Distribution in the Deep-sea Sediments from the Interoceanmetal (IOM) Polymetallic Nodule Exploration Area in the Clarion-Clipperton Fractures Zone, NE Pacific

(2022) Atanas Hikov et al.   COMPTES RENDUS DE L ACADEMIE BULGARE DES SCIENCES

Macrofaunal foraminifera from a former benthic impact experiment site (IOM contract area) in the abyssal eastern Clarion-Clipperton Zone

(2022) Zofia Stachowska-Kamińska et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Benthic megafauna of the western Clarion-Clipperton Zone, Pacific Ocean

(2022) Guadalupe Bribiesca-Contreras et al.   ZooKeys

Enhancing Coral Settlement Through a Novel Larval Feeding Protocol

(2022) Colleen Rodd et al.   Frontiers in Marine Science

Bioleaching Test of Polymetallic Nodule Samples from the IOM Exploration Area

(2022) Darina Štyriaková et al.   Minerals

Abyssal fauna of polymetallic nodule exploration areas, eastern Clarion-Clipperton Zone, central Pacific Ocean: Amphinomidae and Euphrosinidae (Annelida, Amphinomida)

(2022) Lenka Neal et al.   ZooKeys

Comparative Reproductive Biology of Deep-Sea Ophiuroids Inhabiting Polymetallic-Nodule Fields in the Clarion-Clipperton Fracture Zone

(2021) Sven R. Laming et al.   Frontiers in Marine Science

Multiple Losses of MSH1, Gain of mtMutS, and Other Changes in the MutS Family of DNA Repair Proteins in Animals

(2021) Viraj Muthye et al.   Genome Biology and Evolution

Environment, ecology, and potential effectiveness of an area protected from deep-sea mining (Clarion Clipperton Zone, abyssal Pacific)

(2021) Daniel O.B. Jones et al.   PROGRESS IN OCEANOGRAPHY

Chemostratigraphic and Textural Indicators of Nucleation and Growth of Polymetallic Nodules from the Clarion-Clipperton Fracture Zone (IOM Claim Area)

(2021) Artur Skowronek et al.   Minerals

Exploration of Polymetallic Nodules and Resource Assessment: A Case Study from the German Contract Area in the Clarion-Clipperton Zone of the Tropical Northeast Pacific

(2021) Thomas Kuhn et al.   Minerals

The Biodiversity and Distribution of Abyssal Benthic Foraminifera and Their Possible Ecological Roles: A Synthesis Across the Clarion-Clipperton Zone

(2021) Andrew J. Gooday et al.   Frontiers in Marine Science

Megafaunal Ecology of the Western Clarion Clipperton Zone

(2021) Jennifer M. Durden et al.   Frontiers in Marine Science

Eukaryotic Biodiversity and Spatial Patterns in the Clarion-Clipperton Zone and Other Abyssal Regions: Insights From Sediment DNA and RNA Metabarcoding

(2021) Franck Lejzerowicz et al.   Frontiers in Marine Science

Diversity of Deep-Sea Scale-Worms (Annelida, Polynoidae) in the Clarion-Clipperton Fracture Zone

(2021) Paulo Bonifácio et al.   Frontiers in Marine Science

Biogeography and Connectivity Across Habitat Types and Geographical Scales in Pacific Abyssal Scavenging Amphipods

(2021) Guadalupe Bribiesca-Contreras et al.   Frontiers in Marine Science

IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

(2020) Bui Quang Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Transcriptome‐based target‐enrichment baits for stony corals (Cnidaria: Anthozoa: Scleractinia)

(2020) Randolph Z.B. Quek et al.   Molecular Ecology Resources

The complete mitochondrial genome of Plumarella spinosa (Octocorallia: Calcaxonia: Primnoidae) from South Korea

(2020) Eun Hwa Choi et al.   Mitochondrial DNA Part B-Resources

Macrostylis metallicola spec. nov.—an isopod with geographically clustered genetic variability from a polymetallic-nodule area in the Clarion-Clipperton Fracture Zone

(2020) Torben Riehl et al.   PeerJ

Xenophyophores (Rhizaria, Foraminifera), including four new species and two new genera, from the western Clarion-Clipperton Zone (abyssal equatorial Pacific)

(2020) Andrew J. Gooday et al.   EUROPEAN JOURNAL OF PROTISTOLOGY

Multi-scale variations in invertebrate and fish megafauna in the mid-eastern Clarion Clipperton Zone

(2020) Erik Simon-Lledó et al.   PROGRESS IN OCEANOGRAPHY

Diversity and spatial patterns of foraminiferal assemblages in the eastern Clarion–Clipperton zone (abyssal eastern equatorial Pacific)

(2019) Aurélie Goineau et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models

(2019) Diego Darriba et al.   MOLECULAR BIOLOGY AND EVOLUTION

Biogeography and population structure of predominant macrofaunal taxa (Annelida and Isopoda) in abyssal polymetallic nodule fields: implications for conservation and management

(2019) Annika Janssen et al.   Marine Biodiversity

Larval assemblages over the abyssal plain in the Pacific are highly diverse and spatially patchy

(2019) Oliver Kersten et al.   PeerJ

A phylogenetic analysis of the Primnoidae (Anthozoa: Octocorallia: Calcaxonia) with analyses of character evolution and a key to the genera and subgenera

(2018) Stephen D. Cairns et al.   BMC EVOLUTIONARY BIOLOGY

Implications of population connectivity studies for the design of marine protected areas in the deep sea: An example of a demosponge from the Clarion-Clipperton Zone

(2018) Sergi Taboada et al.   MOLECULAR ECOLOGY

Xenophyophores (Rhizaria, Foraminifera) from the Eastern Clarion-Clipperton Zone (equatorial Pacific): the Genus Psammina

(2018) Andrew J. Gooday et al.   PROTIST

A new genus and species of abyssal sponge commonly encrusting polymetallic nodules in the Clarion-Clipperton Zone, East Pacific Ocean

(2017) Swee-Cheng Lim et al.   SYSTEMATICS AND BIODIVERSITY

Mitochondrial genome and polymorphic microsatellite markers from the abyssal sponge Plenaster craigi Lim & Wiklund, 2017: tools for understanding the impact of deep-sea mining

(2017) Sergi Taboada et al.   Marine Biodiversity

HybPiper: Extracting Coding Sequence and Introns for Phylogenetics from High-Throughput Sequencing Reads Using Target Enrichment

(2016) Matthew G. Johnson et al.   Applications in Plant Sciences

Xenophyophores (Rhizaria, Foraminifera) from the Russian license area of the Clarion-Clipperton Zone (eastern equatorial Pacific), with the description of three new species

(2016) O. E. Kamenskaya et al.   Marine Biodiversity

Insights into the abundance and diversity of abyssal megafauna in a polymetallic-nodule region in the eastern Clarion-Clipperton Zone

(2016) Diva J. Amon et al.   Scientific Reports

New abyssal Primnoidae (Anthozoa: Octocorallia) from the Clarion-Clipperton Fracture Zone, equatorial northeastern Pacific

(2015) Stephen D. Cairns   Marine Biodiversity

Xenophyophores (Protista, Foraminifera) from the Clarion-Clipperton Fracture Zone with description of three new species

(2015) O. E. Kamenskaya et al.   Marine Biodiversity

Octocoral Mitochondrial Genomes Provide Insights into the Phylogenetic History of Gene Order Rearrangements, Order Reversals, and Cnidarian Phylogenetics

(2014) D. F. Figueroa et al.   Genome Biology and Evolution

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

(2013) Marc Lohse et al.   NUCLEIC ACIDS RESEARCH

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

MITOS: Improved de novo metazoan mitochondrial genome annotation

(2012) Matthias Bernt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Large, enigmatic foraminiferan-like protists in the eastern part of the Clarion-Clipperton Fracture Zone (abyssal north-eastern subequatorial Pacific): biodiversity and vertical distribution in the sediment

(2012) Olga Kamenskaya et al.   Marine Biodiversity

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Extreme longevity in proteinaceous deep-sea corals

(2009) E. B. Roark et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phyutility: a phyloinformatics tool for trees, alignments and molecular data

(2008) S. A. Smith et al.   BIOINFORMATICS

A Review of the Octocorallia (Cnidaria: Anthozoa) from Hawai‘i and Adjacent Seamounts: The Genus Narella Gray, 18701

(2007) Stephen D. Cairns et al.   PACIFIC SCIENCE