Characterization and genomic analysis of Stutzerimonas stutzeri phage vB_PstS_ZQG1, representing a novel viral genus

Discovery of an Abundant Viral Genus in Polar Regions through the Isolation and Genomic Characterization of a New Virus against Oceanospirillaceae

(2023) Wenjing Zhang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The role of TolA, TolB, and TolR in cell morphology, OMVs production, and virulence of Salmonella Choleraesuis

(2022) Quan Li et al.   AMB Express

Filamentous prophage capsid proteins contribute to superinfection exclusion and phage defence in Pseudomonas aeruginosa

(2022) Weiquan Wang et al.   ENVIRONMENTAL MICROBIOLOGY

Roles of the Tol/Pal System in Bacterial Pathogenesis and Its Application to Antibacterial Therapy

(2022) Hidetada Hirakawa et al.   Vaccines

Characterization and Genomic Analysis of ssDNA Vibriophage vB_VpaM_PG19 within Microviridae , Representing a Novel Viral Genus

(2022) Ruizhe Guo et al.   Microbiology Spectrum

Genome-Based Taxonomy of the Genus Stutzerimonas and Proposal of S. frequens sp. nov. and S. degradans sp. nov. and Emended Descriptions of S. perfectomarina and S. chloritidismutans

(2022) Margarita Gomila et al.   Microorganisms

Unraveling the viral dark matter through viral metagenomics

(2022) Tasha M. Santiago-Rodriguez et al.   Frontiers in Immunology

IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata

(2022) Antonio Pedro Camargo et al.   NUCLEIC ACIDS RESEARCH

Isolation and characterization of the novel Pseudomonas stutzeri bacteriophage 8P

(2021) Xinwu Liu et al.   ARCHIVES OF VIROLOGY

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

(2021) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

A novel temperate phage, vB_PstS-pAN, induced from the naphthalene-degrading bacterium Pseudomonas stutzeri AN10

(2021) Zhou Feng et al.   ARCHIVES OF VIROLOGY

Changes to virus taxonomy and to the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2021)

(2021) Peter J. Walker et al.   ARCHIVES OF VIROLOGY

Characterization and genomic analysis of the first Oceanospirillum phage, vB_OliS_GJ44, representing a novel siphoviral cluster

(2021) Wenjing Zhang et al.   BMC GENOMICS

Past, present and future of the boundaries of the Pseudomonas genus: Proposal of Stutzerimonas gen. Nov

(2021) Jorge Lalucat et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Genome and Ecology of a Novel Alteromonas Podovirus, ZP6, Representing a New Viral Genus, Mareflavirus

(2021) Ziyue Wang et al.   Microbiology Spectrum

A novel vibriophage exhibits inhibitory activity against host protein synthesis machinery

(2020) Khrongkhwan Thammatinna et al.   Scientific Reports

Directional conformer exchange in dihydrofolate reductase revealed by single-molecule nanopore recordings

(2020) Nicole Stéphanie Galenkamp et al.   Nature Chemistry

The Tol-Pal system is required for peptidoglycan-cleaving enzymes to complete bacterial cell division

(2020) Anastasiya A. Yakhnina et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads

(2020) Mengyang Xu et al.   GigaScience

Bioelectrochemical nitrogen fixation to extracellular ammonium by Pseudomonas stutzeri

(2020) Shanshan Chen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

CheckV assesses the quality and completeness of metagenome-assembled viral genomes

(2020) Stephen Nayfach et al.   NATURE BIOTECHNOLOGY

Marine DNA Viral Macro- and Microdiversity from Pole to Pole

(2019) Ann C. Gregory et al.   CELL

Taxonomic assignment of uncultivated prokaryotic virus genomes is enabled by gene-sharing networks

(2019) Ho Bin Jang et al.   NATURE BIOTECHNOLOGY

Metabolic and biogeochemical consequences of viral infection in aquatic ecosystems

(2019) Amy E. Zimmerman et al.   NATURE REVIEWS MICROBIOLOGY

Minimap2: pairwise alignment for nucleotide sequences

(2018) Heng Li   BIOINFORMATICS

Phage spanins: diversity, topological dynamics and gene convergence

(2018) Rohit Kongari et al.   BMC BIOINFORMATICS

ALR encoding dCMP deaminase is critical for DNA damage repair, cell cycle progression and plant development in rice

(2017) Mei Niu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Origins and challenges of viral dark matter

(2017) Siddharth R. Krishnamurthy et al.   VIRUS RESEARCH

Characterization of a broad host-spectrum virulent Salmonella bacteriophage fmb-p1 and its application on duck meat

(2017) Changbao Wang et al.   VIRUS RESEARCH

Highly efficient integration of the viral portal proteins from different types of phages into planar bilayers for the black lipid membrane analysis

(2016) Peng Jing et al.   Molecular BioSystems

tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes

(2016) Todd M. Lowe et al.   NUCLEIC ACIDS RESEARCH

Isolation and characterization of a bacteriophage phiEap-2 infecting multidrug resistant Enterobacter aerogenes

(2016) Erna Li et al.   Scientific Reports

Abundant SAR11 viruses in the ocean

(2013) Yanlin Zhao et al.   NATURE

The Pacific Ocean Virome (POV): A Marine Viral Metagenomic Dataset and Associated Protein Clusters for Quantitative Viral Ecology

(2013) Bonnie L. Hurwitz et al.   PLoS One

Genome of a SAR116 bacteriophage shows the prevalence of this phage type in the oceans

(2013) I. Kang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Enzymology of a Viral Genome Packaging Motor Is Influenced by the Assembly State of the Motor Subunits

(2012) Benjamin T. Andrews et al.   BIOCHEMISTRY

Genome Sequence of the Moderately Halotolerant, Arsenite-Oxidizing Bacterium Pseudomonas stutzeri TS44

(2012) X. Li et al.   JOURNAL OF BACTERIOLOGY

The Spanin Complex Is Essential for Lambda Lysis

(2012) J. Berry et al.   JOURNAL OF BACTERIOLOGY

Comparative genomic analysis of bacteriophages specific to the channel catfish pathogen Edwardsiella ictaluri

(2011) Abel Carrias et al.   Virology Journal

Bacteriophages and their genomes

(2011) Graham F Hatfull et al.   Current Opinion in Virology

Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments

(2010) Matthew B. Sullivan et al.   ENVIRONMENTAL MICROBIOLOGY

Marine Prasinovirus Genomes Show Low Evolutionary Divergence and Acquisition of Protein Metabolism Genes by Horizontal Gene Transfer

(2010) H. Moreau et al.   JOURNAL OF VIROLOGY

Genomic analysis of multiple Roseophage SIO1 strains

(2009) Florent Angly et al.   ENVIRONMENTAL MICROBIOLOGY

The phage   major tail protein structure reveals a common evolution for long-tailed phages and the type VI bacterial secretion system

(2009) L. G. Pell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA