Zoom-in to molecular mechanisms underlying root growth and function under heterogeneous soil environment and abiotic stresses

Phytochelatins: Sulfur-Containing Metal(loid)-Chelating Ligands in Plants

(2023) Ilya V. Seregin et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Plasma membrane-associated calcium signaling regulates arsenate tolerance in Arabidopsis

(2023) Yisong Liu et al.   PLANT PHYSIOLOGY

RALF1 peptide triggers biphasic root growth inhibition upstream of auxin biosynthesis

(2022) Lanxin Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ethylene inhibits rice root elongation in compacted soil via ABA- and auxin-mediated mechanisms

(2022) Guoqiang Huang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Root twisting drives halotropism via stress-induced microtubule reorientation

(2022) Bo Yu et al.   DEVELOPMENTAL CELL

Plant roots sense soil compaction through restricted ethylene diffusion

(2021) Bipin K. Pandey et al.   SCIENCE

MYB3R-mediated active repression of cell cycle and growth under salt stress in Arabidopsis thaliana

(2021) Toru Okumura et al.   JOURNAL OF PLANT RESEARCH

The SLIM1 transcription factor is required for arsenic resistance in Arabidopsis thaliana

(2021) Timothy O. Jobe et al.   FEBS LETTERS

Low ABA concentration promotes root growth and hydrotropism through relief of ABA INSENSITIVE 1-mediated inhibition of plasma membrane H+-ATPase 2

(2021) Rui Miao et al.   Science Advances

Abscisic acid signaling activates distinct VND transcription factors to promote xylem differentiation in Arabidopsis

(2021) Prashanth Ramachandran et al.   CURRENT BIOLOGY

Arsenite provides a selective signal that coordinates arsenate uptake and detoxification through the regulation of PHR1 stability in Arabidopsis

(2021) Cristina Navarro et al.   Molecular Plant

The tonoplast-localized transporter OsABCC9 is involved in cadmium tolerance and accumulation in rice

(2021) Guangzhe Yang et al.   PLANT SCIENCE

ENHANCED GRAVITROPISM 2 encodes a STERILE ALPHA MOTIF–containing protein that controls root growth angle in barley and wheat

(2021) Gwendolyn K. Kirschner et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Spatial regulation of thermomorphogenesis by HY5 and PIF4 in Arabidopsis

(2021) Sanghwa Lee et al.   Nature Communications

Cell surface and intracellular auxin signalling for H+ fluxes in root growth

(2021) Lanxin Li et al.   NATURE

Hydrotropism in the primary roots of maize

(2020) Yafang Wang et al.   NEW PHYTOLOGIST

High Temperature can Change Root System Architecture and Intensify Root Interactions of Plant Seedlings

(2020) Hongxia Luo et al.   Frontiers in Plant Science

PIN-LIKES Coordinate Brassinosteroid Signaling with Nuclear Auxin Input in Arabidopsis thaliana

(2020) Lin Sun et al.   CURRENT BIOLOGY

Apoplastic Hydrogen Peroxide in the Growth Zone of the Maize Primary Root. Increased Levels Differentially Modulate Root Elongation Under Well-Watered and Water-Stressed Conditions

(2020) Priya Voothuluru et al.   Frontiers in Plant Science

Should Root Plasticity Be a Crop Breeding Target?

(2020) Hannah M. Schneider et al.   Frontiers in Plant Science

Maize lateral root developmental plasticity induced by mild water stress. II : Genotype‐specific spatio‐temporal effects on determinate development

(2020) Tyler G. Dowd et al.   PLANT CELL AND ENVIRONMENT

Comparative analysis reveals gravity is involved in the MIZ1-regulated root hydrotropism

(2020) Ying Li et al.   JOURNAL OF EXPERIMENTAL BOTANY

Root angle modifications by theDRO1homolog improve rice yields in saline paddy fields

(2020) Yuka Kitomi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Light-Dark Modulates Root Hydrotropism Associated with Gravitropism by Involving Amyloplast Response in Arabidopsis

(2020) Ying Li et al.   Cell Reports

Cadmium Inhibits Lateral Root Emergence in Rice by Disrupting OsPIN-Mediated Auxin Distribution and the Protective Effect of OsHMA3

(2020) Han-Qing Wang et al.   PLANT AND CELL PHYSIOLOGY

PILS6 is a temperature-sensitive regulator of nuclear auxin input and organ growth in Arabidopsis thaliana

(2019) Elena Feraru et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The R2R3-MYB transcription factor MYB49 regulates cadmium accumulation

(2019) Ping Zhang et al.   PLANT PHYSIOLOGY

Plasma Membrane-Associated Ca2+-Binding Protein PCaP1 is Involved in Root Hydrotropism of Arabidopsis thaliana

(2019) Natsuki Tanaka-Takada et al.   PLANT AND CELL PHYSIOLOGY

Thermomorphogenesis

(2019) Jorge J. Casal et al.   Annual Review of Plant Biology

A mobile auxin signal connects temperature sensing in cotyledons with growth responses in hypocotyls

(2019) Julia Bellstaedt et al.   PLANT PHYSIOLOGY

A regulatory module controlling stress-induced cell cycle arrest in Arabidopsis

(2019) Naoki Takahashi et al.   eLife

Root System Depth in Arabidopsis Is Shaped by EXOCYST70A3 via the Dynamic Modulation of Auxin Transport

(2019) Takehiko Ogura et al.   CELL

Abscisic Acid Coordinates Dose-Dependent Developmental and Hydraulic Responses of Roots to Water Deficit

(2019) Miguel A. Rosales et al.   PLANT PHYSIOLOGY

Variation of a major facilitator superfamily gene contributes to differential cadmium accumulation between rice subspecies

(2019) Huili Yan et al.   Nature Communications

Abiotic stress modulates root patterning via ABA-regulated microRNA expression in the endodermis initials

(2019) Daria Bloch et al.   DEVELOPMENT

Asymmetric distribution of cytokinins determines root hydrotropism in Arabidopsis thaliana

(2019) Jinke Chang et al.   CELL RESEARCH

Halotropism requires phospholipase Dζ1‐mediated modulation of cellular polarity of auxin transport carriers

(2019) Ruud A. Korver et al.   PLANT CELL AND ENVIRONMENT

The FERONIA Receptor Kinase Maintains Cell-Wall Integrity during Salt Stress through Ca 2+ Signaling

(2018) Wei Feng et al.   CURRENT BIOLOGY

Continuous root xylem formation and vascular acclimation to water deficit involves endodermal ABA signalling via miR165

(2018) Prashanth Ramachandran et al.   DEVELOPMENT

Cadmium and arsenic affect root development in Oryza sativa L. negatively interacting with auxin

(2018) M. Ronzan et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

Maize lateral root developmental plasticity induced by mild water stress. I: Genotypic variation across a high-resolution series of water potentials

(2018) Tyler G. Dowd et al.   PLANT CELL AND ENVIRONMENT

Comparative Analysis of Arabidopsis Ecotypes Reveals a Role for Brassinosteroids in Root Hydrotropism

(2018) Rui Miao et al.   PLANT PHYSIOLOGY

Root-tip-mediated inhibition of hydrotropism is accompanied with the suppression of asymmetric expression of auxin-inducible genes in response to moisture gradients in cucumber roots

(2018) Nobuharu Fujii et al.   PLoS One

Growth is required for perception of water availability to pattern root branches in plants

(2018) Neil E. Robbins et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MIZ1 regulates ECA1 to generate a slow, long-distance phloem-transmitted Ca2+signal essential for root water tracking inArabidopsis

(2018) Doron Shkolnik et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular Regulation of CBF Signaling in Cold Acclimation

(2018) Yiting Shi et al.   TRENDS IN PLANT SCIENCE

A defensin-like protein drives cadmium efflux and allocation in rice

(2018) Jin-Song Luo et al.   Nature Communications

The Xerobranching Response Represses Lateral Root Formation When Roots Are Not in Contact with Water

(2018) Beata Orman-Ligeza et al.   CURRENT BIOLOGY

MdMYB88 and MdMYB124 Enhance Drought Tolerance by Modulating Root Vessels and Cell Walls in Apple

(2018) Dali Geng et al.   PLANT PHYSIOLOGY

Transcriptome analysis reveals interplay between hormones, ROS metabolism and cell wall biosynthesis for drought-induced root growth in wheat

(2018) Monika Dalal et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Natural variation at XND1 impacts root hydraulics and trade-off for stress responses in Arabidopsis

(2018) Ning Tang et al.   Nature Communications

Cold stress response in Arabidopsis thaliana is mediated by GNOM ARF-GEF

(2018) Mohammad A. Ashraf et al.   PLANT JOURNAL

Root branching toward water involves posttranslational modification of transcription factor ARF7

(2018) Beatriz Orosa-Puente et al.   SCIENCE

Auxin transport and response requirements for root hydrotropism differ between plant species

(2017) Yusuke Nakajima et al.   JOURNAL OF EXPERIMENTAL BOTANY

Gravitropism interferes with hydrotropism via counteracting auxin dynamics in cucumber roots: clinorotation and spaceflight experiments

(2017) Keita Morohashi et al.   NEW PHYTOLOGIST

Auxin steers root cell expansion via apoplastic pH regulation inArabidopsis thaliana

(2017) Elke Barbez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Brassinosteroid signaling-dependent root responses to prolonged elevated ambient temperature

(2017) Sara Martins et al.   Nature Communications

In Arabidopsis thaliana Cadmium Impact on the Growth of Primary Root by Altering SCR Expression and Auxin-Cytokinin Cross-Talk

(2017) Leonardo Bruno et al.   Frontiers in Plant Science

OsARM1, an R2R3 MYB Transcription Factor, Is Involved in Regulation of the Response to Arsenic Stress in Rice

(2017) Feng-Zhu Wang et al.   Frontiers in Plant Science

The Biphasic Root Growth Response to Abscisic Acid in Arabidopsis Involves Interaction with Ethylene and Auxin Signalling Pathways

(2017) Xiaoqing Li et al.   Frontiers in Plant Science

OsPT4 Contributes to Arsenate Uptake and Transport in Rice

(2017) Ying Ye et al.   Frontiers in Plant Science

Horizontal and vertical variability of observed soil temperatures

(2017) Bradley G. Illston et al.   Geoscience Data Journal

Calcium-dependent protein kinase CPK31 interacts with arsenic transporter AtNIP1;1 and regulates arsenite uptake in Arabidopsis thaliana

(2017) Ruijie Ji et al.   PLoS One

Toxic Heavy Metal and Metalloid Accumulation in Crop Plants and Foods

(2016) Stephan Clemens et al.   Annual Review of Plant Biology

Modeling halotropism: a key role for root tip architecture and reflux loop remodeling in redistributing auxin

(2016) Thea van den Berg et al.   DEVELOPMENT

The role of OsPT8 in arsenate uptake and varietal difference in arsenate tolerance in rice

(2016) Peitong Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Hydrotropism: Root Bending Does Not Require Auxin Redistribution

(2016) Doron Shkolnik et al.   Molecular Plant

Growing Out of Stress: The Role of Cell- and Organ-Scale Growth Control in Plant Water-Stress Responses

(2016) Wei Feng et al.   PLANT CELL

Reactive oxygen species tune root tropic responses

(2016) Gat Krieger et al.   PLANT PHYSIOLOGY

OsHAC1;1 and OsHAC1;2 Function as Arsenate Reductases and Regulate Arsenic Accumulation

(2016) Shulin Shi et al.   PLANT PHYSIOLOGY

Enhanced arsenic sensitivity with excess phytochelatin accumulation in shoots of aSULTR1;2knockout mutant ofArabidopsis thaliana(L.) Heynh

(2016) Sho Nishida et al.   SOIL SCIENCE AND PLANT NUTRITION

HSP90 regulates temperature-dependent seedling growth in Arabidopsis by stabilizing the auxin co-receptor F-box protein TIR1

(2016) Renhou Wang et al.   Nature Communications

Regulation of the plasma membrane proton pump (H + -ATPase) by phosphorylation

(2015) Miyoshi Haruta et al.   CURRENT OPINION IN PLANT BIOLOGY

Cadmium-inducible expression of the ABC-type transporter AtABCC3 increases phytochelatin-mediated cadmium tolerance in Arabidopsis

(2015) Patrizia Brunetti et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Physiology of Adventitious Roots

(2015) Bianka Steffens et al.   PLANT PHYSIOLOGY

GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems

(2015) Rubén Rellán-Álvarez et al.   eLife

Low Temperature Inhibits Root Growth by Reducing Auxin Accumulation via ARR1/12

(2015) Jiang Zhu et al.   PLANT AND CELL PHYSIOLOGY

Abscisic acid inhibits root growth in Arabidopsis through ethylene biosynthesis

(2014) Xingju Luo et al.   PLANT JOURNAL

The Origin and Early Evolution of Roots

(2014) P. Kenrick et al.   PLANT PHYSIOLOGY

Transcriptional Regulation of Cell Cycle Genes in Response to Abiotic Stresses Correlates with Dynamic Changes in Histone Modifications in Maize

(2014) Lin Zhao et al.   PLoS One

Plant roots use a patterning mechanism to position lateral root branches toward available water

(2014) Y. Bao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A rice ABC transporter, OsABCC1, reduces arsenic accumulation in the grain

(2014) W.-Y. Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Salt stress-induced Ca2+ waves are associated with rapid, long-distance root-to-shoot signaling in plants

(2014) W.-G. Choi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Natural variation in arsenate tolerance identifies an arsenate reductase in Arabidopsis thaliana

(2014) Eduardo Sánchez-Bermejo et al.   Nature Communications

Genome-wide Association Mapping Identifies a New Arsenate Reductase Enzyme Critical for Limiting Arsenic Accumulation in Plants

(2014) Dai-Yin Chao et al.   PLOS BIOLOGY

MIZ1-regulated hydrotropism functions in the growth and survival of Arabidopsis thaliana under natural conditions

(2013) Satoru Iwata et al.   ANNALS OF BOTANY

Steep, cheap and deep: an ideotype to optimize water and N acquisition by maize root systems

(2013) Jonathan P. Lynch   ANNALS OF BOTANY

Halotropism Is a Response of Plant Roots to Avoid a Saline Environment

(2013) Carlos S. Galvan-Ampudia et al.   CURRENT BIOLOGY

Auxin Controls Gravitropic Setpoint Angle in Higher Plant Lateral Branches

(2013) Suruchi Roychoudhry et al.   CURRENT BIOLOGY

An Auxin Transport Mechanism Restricts Positive Orthogravitropism in Lateral Roots

(2013) Michel Ruiz Rosquete et al.   CURRENT BIOLOGY

Control of root system architecture by DEEPER ROOTING 1 increases rice yield under drought conditions

(2013) Yusaku Uga et al.   NATURE GENETICS

Cellular Auxin Homeostasis under High Temperature Is Regulated through a SORTING NEXIN1-Dependent Endosomal Trafficking Pathway

(2013) T. Hanzawa et al.   PLANT CELL

WRKY6 Transcription Factor Restricts Arsenate Uptake and Transposon Activation in Arabidopsis

(2013) G. Castrillo et al.   PLANT CELL

Endodermal ABA Signaling Promotes Lateral Root Quiescence during Salt Stress inArabidopsisSeedlings

(2013) Lina Duan et al.   PLANT CELL

A Spatio-Temporal Understanding of Growth Regulation during the Salt Stress Response in Arabidopsis

(2013) Y. Geng et al.   PLANT CELL

Green Revolution research saved an estimated 18 to 27 million hectares from being brought into agricultural production

(2013) J. R. Stevenson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The evolution of root hairs and rhizoids

(2012) Victor A.S. Jones et al.   ANNALS OF BOTANY

MIZ1, an essential protein for root hydrotropism, is associated with the cytoplasmic face of the endoplasmic reticulum membrane inArabidopsisroot cells

(2012) Tomokazu Yamazaki et al.   FEBS LETTERS

An altered hydrotropic response (ahr1) mutant of Arabidopsis recovers root hydrotropism with cytokinin

(2012) Manuel Saucedo et al.   JOURNAL OF EXPERIMENTAL BOTANY

Root carbon and protein metabolism associated with heat tolerance

(2012) B. Huang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Traits and selection strategies to improve root systems and water uptake in water-limited wheat crops

(2012) A. P. Wasson et al.   JOURNAL OF EXPERIMENTAL BOTANY

Apoplastic hydrogen peroxide in the growth zone of the maize primary root under water stress. I. Increased levels are specific to the apical region of growth maintenance

(2012) Priyamvada Voothuluru et al.   JOURNAL OF EXPERIMENTAL BOTANY

Abscisic acid accumulation modulates auxin transport in the root tip to enhance proton secretion for maintaining root growth under moderate water stress

(2012) Weifeng Xu et al.   NEW PHYTOLOGIST

Overexpression of MIZU-KUSSEI1 Enhances the Root Hydrotropic Response by Retaining Cell Viability Under Hydrostimulated Conditions in Arabidopsis thaliana

(2012) Yutaka Miyazawa et al.   PLANT AND CELL PHYSIOLOGY

Nramp5 Is a Major Transporter Responsible for Manganese and Cadmium Uptake in Rice

(2012) A. Sasaki et al.   PLANT CELL

Light and abscisic acid signalling are integrated by MIZ1 gene expression and regulate hydrotropic response in roots of Arabidopsis thaliana

(2012) TEPPEI MORIWAKI et al.   PLANT CELL AND ENVIRONMENT

PYRABACTIN RESISTANCE1-LIKE8 Plays an Important Role for the Regulation of Abscisic Acid Signaling in Root

(2012) R. Antoni et al.   PLANT PHYSIOLOGY

Oxidative post translational modifications of proteins related to cell cycle are involved in cadmium toxicity in wheat seedlings

(2012) Liliana B. Pena et al.   PLANT SCIENCE

Non-cell-autonomous microRNA165 acts in a dose-dependent manner to regulate multiple differentiation status in the Arabidopsis root

(2011) S. Miyashima et al.   DEVELOPMENT

MIZU-KUSSEI1 plays an essential role in the hydrotropism of lateral roots in Arabidopsis thaliana

(2011) Satoru Iwata et al.   ENVIRONMENTAL AND EXPERIMENTAL BOTANY

The OsNRAMP1 iron transporter is involved in Cd accumulation in rice

(2011) Ryuichi Takahashi et al.   JOURNAL OF EXPERIMENTAL BOTANY

Disarrangement of actin filaments and Ca2+ gradient by CdCl2 alters cell wall construction in Arabidopsis thaliana root hairs by inhibiting vesicular trafficking

(2011) Jun-Ling Fan et al.   JOURNAL OF PLANT PHYSIOLOGY

Mutations in Rice (Oryza sativa) Heavy Metal ATPase 2 (OsHMA2) Restrict the Translocation of Zinc and Cadmium

(2011) Namiko Satoh-Nagasawa et al.   PLANT AND CELL PHYSIOLOGY

The phytochelatin transporters AtABCC1 and AtABCC2 mediate tolerance to cadmium and mercury

(2011) Jiyoung Park et al.   PLANT JOURNAL

PHYTOCHROME-INTERACTING FACTOR 4 (PIF4) regulates auxin biosynthesis at high temperature

(2011) K. A. Franklin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate

(2010) Annelie Carlsbecker et al.   NATURE

The role of the rice aquaporin Lsi1 in arsenite efflux from roots

(2010) Fang-Jie Zhao et al.   NEW PHYTOLOGIST

Root halotropism: Salinity effects onBassia indicaroot

(2010) O. Shelef et al.   PLANT BIOSYSTEMS

Gene limiting cadmium accumulation in rice

(2010) D. Ueno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arsenic tolerance in Arabidopsis is mediated by two ABCC-type phytochelatin transporters

(2010) W.-Y. Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

High Temperature-Mediated Adaptations in Plant Architecture Require the bHLH Transcription Factor PIF4

(2009) Maria A. Koini et al.   CURRENT BIOLOGY

Auxin Response in Arabidopsis under Cold Stress: Underlying Molecular Mechanisms

(2009) K. Shibasaki et al.   PLANT CELL

Regulation of growth response to water stress in the soybean primary root. I. Proteomic analysis reveals region-specific regulation of phenylpropanoid metabolism and control of free iron in the elongation zone

(2009) MINEO YAMAGUCHI et al.   PLANT CELL AND ENVIRONMENT

Involvement of Arabidopsis thaliana phospholipase Dζ2 in root hydrotropism through the suppression of root gravitropism

(2009) Yukimi Y. Taniguchi et al.   PLANTA

HMA P-type ATPases are the major mechanism for root-to-shoot Cd translocation in Arabidopsis thaliana

(2008) Chong Kum Edwin Wong et al.   NEW PHYTOLOGIST

Small Ubiquitin-Like Modifier Proteases OVERLY TOLERANT TO SALT1 and -2 Regulate Salt Stress Responses in Arabidopsis

(2008) L. Conti et al.   PLANT CELL

GNOM-Mediated Vesicular Trafficking Plays an Essential Role in Hydrotropism of Arabidopsis Roots

(2008) Y. Miyazawa et al.   PLANT PHYSIOLOGY

AtHMA3, a P1B-ATPase Allowing Cd/Zn/Co/Pb Vacuolar Storage in Arabidopsis

(2008) M. Morel et al.   PLANT PHYSIOLOGY

Genotypic Variations in Responses of Lateral Root Development to Transient Moisture Stresses in Rice Cultivars

(2008) Roel R. Suralta et al.   PLANT PRODUCTION SCIENCE