Functional characterization of a gene locus from an uncultured gutBacteroidesconferring xylo-oligosaccharides utilization toEscherichia coli

Molecular Dissection of Xyloglucan Recognition in a Prominent Human Gut Symbiont

(2016) Alexandra S. Tauzin et al.   mBio

Structural Biology of the Major Facilitator Superfamily Transporters

(2015) Nieng Yan   Annual Review of Biophysics

Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism

(2015) Fiona Cuskin et al.   NATURE

Glycan complexity dictates microbial resource allocation in the large intestine

(2015) Artur Rogowski et al.   Nature Communications

Current and future resources for functional metagenomics

(2015) Kathy N. Lam et al.   Frontiers in Microbiology

Strong spurious transcription likely contributes to DNA insert bias in typical metagenomic clone libraries

(2015) Kathy N. Lam et al.   Microbiome

Automatic prediction of polysaccharide utilization loci in Bacteroidetes species

(2014) Nicolas Terrapon et al.   BIOINFORMATICS

CAZyme discovery and design for sweet dreams

(2014) Isabelle André et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes

(2014) Johan Larsbrink et al.   NATURE

Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes

(2014) H Bjørn Nielsen et al.   NATURE BIOTECHNOLOGY

Metagenomic scaffolds enable combinatorial lignin transformation

(2014) C. R. Strachan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multifunctional Nutrient-Binding Proteins Adapt Human Symbiotic Bacteria for Glycan Competition in the Gut by Separately Promoting Enhanced Sensing and Catalysis

(2014) E. A. Cameron et al.   mBio

Structural and functional characterization of NanU, a novel high-affinity sialic acid-inducible binding protein of oral and gut-dwelling Bacteroidetes species

(2013) Chatchawal Phansopa et al.   BIOCHEMICAL JOURNAL

The xylan utilization system of the plant pathogenXanthomonas campestrispvcampestriscontrols epiphytic life and reveals common features with oligotrophic bacteria and animal gut symbionts

(2013) Guillaume Déjean et al.   NEW PHYTOLOGIST

Functional Metagenomics Reveals Novel Pathways of Prebiotic Breakdown by Human Gut Bacteria

(2013) Davide A. Cecchini et al.   PLoS One

Glycan recognition by the Bacteroidetes Sus-like systems

(2012) David N Bolam et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Multidomain Carbohydrate-binding Proteins Involved inBacteroides thetaiotaomicronStarch Metabolism

(2012) Elizabeth A. Cameron et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

A Culture-Independent Approach to Unravel Uncultured Bacteria and Functional Genes in a Complex Microbial Community

(2012) Yun Wang et al.   PLoS One

Structural and enzymatic characterization of a glycoside hydrolase family 31 α-xylosidase fromCellvibrio japonicusinvolved in xyloglucan saccharification

(2011) Johan Larsbrink et al.   BIOCHEMICAL JOURNAL

Sialic acid, periodontal pathogens and Tannerella forsythia: stick around and enjoy the feast!

(2011) G. Stafford et al.   Molecular Oral Microbiology

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Escherichia coli σ 70 senses sequence and conformation of the promoter spacer region

(2011) Shivani S. Singh et al.   NUCLEIC ACIDS RESEARCH

IMG: the integrated microbial genomes database and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

Metagenomic Discovery of Biomass-Degrading Genes and Genomes from Cow Rumen

(2011) M. Hess et al.   SCIENCE

Recognition and Degradation of Plant Cell Wall Polysaccharides by Two Human Gut Symbionts

(2011) Eric C. Martens et al.   PLOS BIOLOGY

TonB-Dependent Transporters: Regulation, Structure, and Function

(2010) Nicholas Noinaj et al.   Annual Review of Microbiology

Lipoprotein Sorting in Bacteria

(2010) Suguru Okuda et al.   Annual Review of Microbiology

Escherichia coli Binary Culture Engineered for Direct Fermentation of Hemicellulose to a Biofuel

(2010) H.-D. Shin et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Functional metagenomics to mine the human gut microbiome for dietary fiber catabolic enzymes

(2010) L. Tasse et al.   GENOME RESEARCH

A Novel Sialic Acid Utilization and Uptake System in the Periodontal Pathogen Tannerella forsythia

(2010) S. Roy et al.   JOURNAL OF BACTERIOLOGY

Xylan degradation, a metabolic property shared by rumen and human colonic Bacteroidetes

(2010) Dylan Dodd et al.   MOLECULAR MICROBIOLOGY

Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota

(2010) Jan-Hendrik Hehemann et al.   NATURE

Transcriptomic Response of Lactococcus lactis in Mixed Culture with Staphylococcus aureus

(2009) S. Nouaille et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Comparison of Bacteroides thetaiotaomicron and Escherichia coli 16S rRNA gene expression signals

(2009) M. D. Mastropaolo et al.   MICROBIOLOGY-SGM

Mucosal Glycan Foraging Enhances Fitness and Transmission of a Saccharolytic Human Gut Bacterial Symbiont

(2008) Eric C. Martens et al.   Cell Host & Microbe

High Throughput Gene Expression Measurement with Real Time PCR in a Microfluidic Dynamic Array

(2008) Sandra L. Spurgeon et al.   PLoS One

Starch Catabolism by a Prominent Human Gut Symbiont Is Directed by the Recognition of Amylose Helices

(2008) Nicole M. Koropatkin et al.   STRUCTURE

New substrates for TonB-dependent transport: do we only see the ‘tip of the iceberg’?

(2008) Kristine Schauer et al.   TRENDS IN BIOCHEMICAL SCIENCES