The influence of locus number and information content on species delimitation: an empirical test case in an endangered Mexican salamander

Species discovery and validation in a cryptic radiation of endangered primates: coalescent-based species delimitation in Madagascar's mouse lemurs

(2016) Scott Hotaling et al.   MOLECULAR ECOLOGY

Exon capture optimization in amphibians with large genomes

(2016) Evan McCartney-Melstad et al.   Molecular Ecology Resources

The art and science of species delimitation

(2015) Bruce Rannala   Current Zoology

Combined next-generation sequencing and morphology reveal fine-scale speciation in Crocodile Skinks (Squamata: Scincidae:Tribolonotus)

(2015) Eric N. Rittmeyer et al.   MOLECULAR ECOLOGY

The art and science of species delimitation

(2015) Bruce Rannala   Current Zoology

Quartet Inference from SNP Data Under the Coalescent Model

(2014) Julia Chifman et al.   BIOINFORMATICS

Unguided Species Delimitation Using DNA Sequence Data from Multiple Loci

(2014) Z. Yang et al.   MOLECULAR BIOLOGY AND EVOLUTION

Speciation with gene flow in equids despite extensive chromosomal plasticity

(2014) Hákon Jónsson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Species detection and individual assignment in species delimitation: can integrative data increase efficacy?

(2014) D. L. Edwards et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Bayesian Species Delimitation Can Be Robust to Guide-Tree Inference Errors

(2014) Chi Zhang et al.   SYSTEMATIC BIOLOGY

THE INFLUENCE OF SAMPLING DESIGN ON SPECIES TREE INFERENCE: A NEW RELATIONSHIP FOR THE NEW WORLD CHICKADEES (AVES:POECILE)

(2013) Rebecca B. Harris et al.   EVOLUTION

How to fail at species delimitation

(2013) Bryan C. Carstens et al.   MOLECULAR ECOLOGY

How low can you go? The effects of mutation rate on the accuracy of species-tree estimation

(2013) Hayley C. Lanier et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Coalescent Species Delimitation in Milksnakes (Genus Lampropeltis) and Impacts on Phylogenetic Comparative Analyses

(2013) S. Ruane et al.   SYSTEMATIC BIOLOGY

Poor Fit to the Multispecies Coalescent is Widely Detectable in Empirical Data

(2013) Noah M. Reid et al.   SYSTEMATIC BIOLOGY

Species Delimitation Using Bayes Factors: Simulations and Application to the Sceloporus scalaris Species Group (Squamata: Phrynosomatidae)

(2013) Jared A. Grummer et al.   SYSTEMATIC BIOLOGY

Target Capture and Massively Parallel Sequencing of Ultraconserved Elements for Comparative Studies at Shallow Evolutionary Time Scales

(2013) Brian Tilston Smith et al.   SYSTEMATIC BIOLOGY

Upstream Analyses Create Problems with DNA-Based Species Delimitation

(2013) Melisa Olave et al.   SYSTEMATIC BIOLOGY

Inferring the evolutionary history of divergence despite gene flow in a lizard species, Scincella lateralis (Scincidae), composed of cryptic lineages

(2012) NATHAN D. JACKSON et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

SPECIES DELIMITATION WITH ABC AND OTHER COALESCENT-BASED METHODS: A TEST OF ACCURACY WITH SIMULATIONS AND AN EMPIRICAL EXAMPLE WITH LIZARDS OF THE LIOLAEMUS DARWINII COMPLEX (SQUAMATA: LIOLAEMIDAE)

(2012) Arley Camargo et al.   EVOLUTION

Parallel tagged amplicon sequencing reveals major lineages and phylogenetic structure in the North American tiger salamander (Ambystoma tigrinum) species complex

(2012) Eric M. O'Neill et al.   MOLECULAR ECOLOGY

Full modeling versus summarizing gene-tree uncertainty: Method choice and species-tree accuracy

(2012) L. Lacey Knowles et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

High-Throughput Identification of Informative Nuclear Loci for Shallow-Scale Phylogenetics and Phylogeography

(2012) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Coalescent-based species delimitation in an integrative taxonomy

(2012) Matthew K. Fujita et al.   TRENDS IN ECOLOGY & EVOLUTION

Structurama: Bayesian Inference of Population Structure

(2011) John P. Huelsenbeck et al.   Evolutionary Bioinformatics

Unified Framework to Evaluate Panmixia and Migration Direction Among Multiple Sampling Locations

(2010) P. Beerli et al.   GENETICS

SpedeSTEM: a rapid and accurate method for species delimitation

(2010) DANIEL D. ENCE et al.   Molecular Ecology Resources

Rapid and accurate species tree estimation for phylogeographic investigations using replicated subsampling

(2010) Sarah Hird et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Bayesian species delimitation using multilocus sequence data

(2010) Z. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sources of Error Inherent in Species-Tree Estimation: Impact of Mutational and Coalescent Effects on Accuracy and Implications for Choosing among Different Methods

(2010) Huateng Huang et al.   SYSTEMATIC BIOLOGY

Isolation with Migration Models for More Than Two Populations

(2009) Jody Hey   MOLECULAR BIOLOGY AND EVOLUTION

Species Tree Discordance Traces to Phylogeographic Clade Boundaries in North American Fence Lizards (Sceloporus)

(2009) Adam D. Leaché   SYSTEMATIC BIOLOGY

Evolutionary history of the endangered fish Zoogoneticus quitzeoensis (Bean, 1898) (Cyprinodontiformes: Goodeidae) using a sequential approach to phylogeography based on mitochondrial and nuclear DNA data

(2008) Omar Domínguez-Domínguez et al.   BMC EVOLUTIONARY BIOLOGY

Speciation in the highlands of Mexico: genetic and phenotypic divergence in the Mexican jay (Aphelocoma ultramarina)

(2008) J. E. McCORMACK et al.   MOLECULAR ECOLOGY

Diversification in the northern neotropics: mitochondrial and nuclear DNA phylogeography of the iguanaCtenosaura pectinataand related species

(2008) EUGENIA ZARZA et al.   MOLECULAR ECOLOGY