Population genomics of sexual and asexual lineages in fissiparous ribbon worms (Lineus, Nemertea): hybridization, polyploidy and the Meselson effect

Coalescent Times and Patterns of Genetic Diversity in Species with Facultative Sex: Effects of Gene Conversion, Population Structure, and Heterogeneity

(2015) M. Hartfield et al.   GENETICS

Evolutionary genetic consequences of facultative sex and outcrossing

(2015) M. Hartfield   JOURNAL OF EVOLUTIONARY BIOLOGY

Species Diversity ofRamphogordius sanguineus/Lineus ruber-Like Nemerteans (Nemertea: Heteronemertea) and Geographic Distribution ofR. sanguineus

(2015) Xing-Xing Kang et al.   ZOOLOGICAL SCIENCE

A Taxonomic Catalogue of the Nemerteans (Phylum Nemertea) of Spain and Portugal

(2015) Alfonso Herrera-Bachiller et al.   ZOOLOGICAL SCIENCE

Doubling down on genomes: Polyploidy and crop plants

(2014) Simon Renny-Byfield et al.   AMERICAN JOURNAL OF BOTANY

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

New insights into the phylogeny, systematics and DNA barcoding of Nemertea

(2014) Sebastian Kvist et al.   INVERTEBRATE SYSTEMATICS

Parasitic success without sex - the nematode experience

(2014) P. Castagnone-Sereno et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Genetic causes of transitions from sexual reproduction to asexuality in plants and animals

(2014) M. Neiman et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Recurrent Loss of Sex Is Associated with Accumulation of Deleterious Mutations in Oenothera

(2014) Jesse D. Hollister et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Transcriptomic Approach to Ribbon Worm Systematics (Nemertea): Resolving the Pilidiophora Problem

(2014) Sónia C. S. Andrade et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative population genomics in animals uncovers the determinants of genetic diversity

(2014) J. Romiguier et al.   NATURE

Genetic Control of Contagious Asexuality in the Pea Aphid

(2014) Julie Jaquiéry et al.   PLoS Genetics

Bio++: Efficient Extensible Libraries and Tools for Computational Molecular Evolution

(2013) Laurent Guéguen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga

(2013) Jean-François Flot et al.   NATURE

Population-genomic insights into the evolutionary origin and fate of obligately asexual Daphnia pulex

(2013) A. E. Tucker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular hyperdiversity defines populations of the nematode Caenorhabditis brenneri

(2013) A. Dey et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reference-Free Population Genomics from Next-Generation Transcriptome Data and the Vertebrate–Invertebrate Gap

(2013) Philippe Gayral et al.   PLoS Genetics

On the origin and evolution of apomixis in Boechera

(2013) John T. Lovell et al.   Plant Reproduction

The Population Genomics of a Fast Evolver: High Levels of Diversity, Functional Constraint, and Molecular Adaptation in the Tunicate Ciona intestinalis

(2012) Georgia Tsagkogeorga et al.   Genome Biology and Evolution

Reference-free transcriptome assembly in non-model animals from next-generation sequencing data

(2012) V. CAHAIS et al.   Molecular Ecology Resources

Fast and Robust Characterization of Time-Heterogeneous Sequence Evolutionary Processes Using Substitution Mapping

(2012) Jonathan Romiguier et al.   PLoS One

Potential for clonal animals in longevity and ageing studies

(2011) Helen Nilsson Sköld et al.   BIOGERONTOLOGY

Disentangling ribbon worm relationships: multi-locus analysis supports traditional classification of the phylum Nemertea

(2011) Sónia C. S. Andrade et al.   CLADISTICS

Molecular Evidence for Ancient Asexuality in Timema Stick Insects

(2011) Tanja Schwander et al.   CURRENT BIOLOGY

Deleterious Mutation Accumulation in Asexual Timema Stick Insects

(2011) Lee Henry et al.   MOLECULAR BIOLOGY AND EVOLUTION

Next-generation sequencing of transcriptomes: a guide to RNA isolation in nonmodel animals

(2011) PHILIPPE GAYRAL et al.   Molecular Ecology Resources

MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons

(2011) Vincent Ranwez et al.   PLoS One

Clonality and Recombination in the Life History of an Asexual Arbuscular Mycorrhizal Fungus

(2010) H. C. den Bakker et al.   MOLECULAR BIOLOGY AND EVOLUTION

Gene expression regulation and lineage evolution: the North and South tale of the hybrid polyploid Squalius alburnoides complex

(2010) I. Pala et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

ABySS: A parallel assembler for short read sequence data

(2009) J. T. Simpson et al.   GENOME RESEARCH

Accelerated Mutation Accumulation in Asexual Lineages of a Freshwater Snail

(2009) M. Neiman et al.   MOLECULAR BIOLOGY AND EVOLUTION

On the Origin of Sexual Reproduction

(2009) C. Zimmer   SCIENCE

Signs of sex: what we know and how we know it

(2009) Andrew M. Schurko et al.   TRENDS IN ECOLOGY & EVOLUTION

Genetic tests of ancient asexuality in Root Knot Nematodes reveal recent hybrid origins

(2008) David H Lunt   BMC EVOLUTIONARY BIOLOGY

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS

Phylogenetic Position of Nemertea Derived from Phylogenomic Data

(2008) T. H. Struck et al.   MOLECULAR BIOLOGY AND EVOLUTION

Ancient asexuals: darwinulids not exposed

(2008) Koen Martens et al.   NATURE

Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita

(2008) Pierre Abad et al.   NATURE BIOTECHNOLOGY

The origin and evolution of a unisexual hybrid: Poecilia formosa

(2008) K.P Lampert et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Evidence for degenerate tetraploidy in bdelloid rotifers

(2008) David B. Mark Welch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA