De novo assembly of the transcriptome of Neottopteris nidus using Illumina paired-end sequencing and development of EST-SSR markers

De novo assembly of kenaf (Hibiscus cannabinus) transcriptome using Illumina sequencing for gene discovery and marker identification

(2015) Liwu Zhang et al.   MOLECULAR BREEDING

Characterization of transcriptome and development of novel EST-SSR makers based on next-generation sequencing technology in Neolitsea sericea (Lauraceae) endemic to East Asian land-bridge islands

(2015) Lu-Yao Chen et al.   MOLECULAR BREEDING

Characterization of the global transcriptome using Illumina sequencing and novel microsatellite marker information in seashore paspalum

(2014) Xinping Jia et al.   Genes & Genomics

Characterization of EST-SSR markers in durum wheat EST library and functional analysis of SSR-containing EST fragments

(2014) Ali Akbar Asadi et al.   MOLECULAR GENETICS AND GENOMICS

Large scale in-silico identification and characterization of simple sequence repeats (SSRs) from de novo assembled transcriptome of Catharanthus roseus (L.) G. Don

(2014) Santosh Kumar et al.   PLANT CELL REPORTS

De novo assembly and characterization of fruit transcriptome in Litchi chinensis Sonn and analysis of differentially regulated genes in fruit in response to shading

(2013) Caiqin Li et al.   BMC GENOMICS

Transcriptome-based discovery of pathways and genes related to resistance against Fusarium head blight in wheat landrace Wangshuibai

(2013) Jin Xiao et al.   BMC GENOMICS

Development of an expressed gene catalogue and molecular markers from thede novoassembly of short sequence reads of the lentil (Lens culinarisMedik.) transcriptome

(2013) Priyanka Verma et al.   PLANT BIOTECHNOLOGY JOURNAL

Floral Transcriptome Sequencing for SSR Marker Development and Linkage Map Construction in the Tea Plant (Camellia sinensis)

(2013) Li-Qiang Tan et al.   PLoS One

Transcriptomic analysis of Chinese bayberry (Myrica rubra) fruit development and ripening using RNA-Seq

(2012) Chao Feng et al.   BMC GENOMICS

De novo assembly and characterization of bark transcriptome using Illumina sequencing and development of EST-SSR markers in rubber tree (Hevea brasiliensis Muell. Arg.)

(2012) Dejun Li et al.   BMC GENOMICS

Development and cross-species/genera transferability of microsatellite markers discovered using 454 genome sequencing in chokecherry (Prunus virginiana L.)

(2012) Hongxia Wang et al.   PLANT CELL REPORTS

Transcriptome analysis of the roots at early and late seedling stages using Illumina paired-end sequencing and development of EST-SSR markers in radish

(2012) Shufen Wang et al.   PLANT CELL REPORTS

De novo sequencing and a comprehensive analysis of purple sweet potato (Impomoea batatas L.) transcriptome

(2012) Fuliang Xie et al.   PLANTA

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

(2011) Zhangying Wang et al.   BMC GENOMICS

Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers

(2011) Wenliang Wei et al.   BMC GENOMICS

Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds

(2011) Cheng-Ying Shi et al.   BMC GENOMICS

Transcriptome Sequencing of Hevea brasiliensis for Development of Microsatellite Markers and Construction of a Genetic Linkage Map

(2011) K. Triwitayakorn et al.   DNA RESEARCH

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Transcriptome Sequencing and De Novo Analysis for Yesso Scallop (Patinopecten yessoensis) Using 454 GS FLX

(2011) Rui Hou et al.   PLoS One

Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.)

(2011) H. Zhu et al.   THEORETICAL AND APPLIED GENETICS

Genome-wide characterization of simple sequence repeats in cucumber (Cucumis sativus L.)

(2010) Pablo F Cavagnaro et al.   BMC GENOMICS

Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing

(2010) Bin Wang et al.   NUCLEIC ACIDS RESEARCH

RNA-Seq Analysis of Sulfur-DeprivedChlamydomonasCells Reveals Aspects of Acclimation Critical for Cell Survival

(2010) David González-Ballester et al.   PLANT CELL

Development, characterization, and cross-species/genera transferability of SSR markers for rubber tree (Hevea brasiliensis)

(2010) Fei Yu et al.   PLANT CELL REPORTS

Characterization of microsatellites and gene contents from genome shotgun sequences of mungbean (Vigna radiata (L.) Wilczek)

(2009) Sithichoke Tangphatsornruang et al.   BMC PLANT BIOLOGY

Development of Genome-wide Simple Sequence Repeat Markers Using Whole-genome Shotgun Sequences of Sorghum (Sorghum bicolor (L.) Moench)

(2009) J.-i. Yonemaru et al.   DNA RESEARCH

Stochastic and deterministic processes jointly structure tropical arthropod communities

(2009) M. D. Farnon Ellwood et al.   ECOLOGY LETTERS

The sequence and de novo assembly of the giant panda genome

(2009) Ruiqiang Li et al.   NATURE