期刊
MOLECULAR BIOLOGY AND EVOLUTION
卷 33, 期 12, 页码 3314-3316出版社
OXFORD UNIV PRESS
DOI: 10.1093/molbev/msw196
关键词
TreeScaper; visualization; community detection; phylogenetic trees
资金
- US National Science Foundation [DBI-1262571, DBI-1262476]
- Interuniversity Attraction Poles Programme [IAP VII/19]
- Belgian Science Policy Office
- Div Of Biological Infrastructure
- Direct For Biological Sciences [1262571] Funding Source: National Science Foundation
- Div Of Biological Infrastructure
- Direct For Biological Sciences [1262476] Funding Source: National Science Foundation
Modern phylogenomic analyses often result in large collections of phylogenetic trees representing uncertainty in individual gene trees, variation across genes, or both. Extracting phylogenetic signal from these tree sets can be challenging, as they are difficult to visualize, explore, and quantify. To overcome some of these challenges, we have developed TreeScaper, an application for tree set visualization as well as the identification of distinct phylogenetic signals. GUI and command-line versions of TreeScaper and a manual with tutorials can be downloaded from https://github.com/whuang08/TreeScaper/releases. TreeScaper is distributed under the GNU General Public License.
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