Simultaneous Metabolite, Protein, Lipid Extraction (SIMPLEX): A Combinatorial Multimolecular Omics Approach for Systems Biology
出版年份 2016 全文链接
标题
Simultaneous Metabolite, Protein, Lipid Extraction (SIMPLEX): A Combinatorial Multimolecular Omics Approach for Systems Biology
作者
关键词
-
出版物
MOLECULAR & CELLULAR PROTEOMICS
Volume 15, Issue 4, Pages 1453-1466
出版商
American Society for Biochemistry & Molecular Biology (ASBMB)
发表日期
2016-01-27
DOI
10.1074/mcp.m115.053702
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- A Review of Odd-Chain Fatty Acid Metabolism and the Role of Pentadecanoic Acid (C15:0) and Heptadecanoic Acid (C17:0) in Health and Disease
- (2015) Benjamin Jenkins et al. MOLECULES
- PeptideShaker enables reanalysis of MS-derived proteomics data sets
- (2015) Marc Vaudel et al. NATURE BIOTECHNOLOGY
- Single-cell mass spectrometry reveals small molecules that affect cell fates in the 16-cell embryo
- (2015) Rosemary M. Onjiko et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Targeted metabolomics in cultured cells and tissues by mass spectrometry: Method development and validation
- (2014) Anas M. Abdel Rahman et al. ANALYTICA CHIMICA ACTA
- Lipidomics Profiling and Risk of Cardiovascular Disease in the Prospective Population-Based Bruneck Study
- (2014) Christin Stegemann et al. CIRCULATION
- Novel Quantitative Metabolomic Approach for the Study of Stress Responses of Plant Root Metabolism
- (2014) Kefeng Li et al. JOURNAL OF PROTEOME RESEARCH
- Integrative Analysis of Transcriptomics, Proteomics, and Metabolomics Data of White Adipose and Liver Tissue of High-Fat Diet and Rosiglitazone-Treated Insulin-Resistant Mice Identified Pathway Alterations and Molecular Hubs
- (2014) David Meierhofer et al. JOURNAL OF PROTEOME RESEARCH
- ProteomeXchange provides globally coordinated proteomics data submission and dissemination
- (2014) Juan A Vizcaíno et al. NATURE BIOTECHNOLOGY
- Controlling low rates of cell differentiation through noise and ultrahigh feedback
- (2014) R. Ahrends et al. SCIENCE
- Clinical and non-targeted metabolomic profiling of homozygous carriers of Transcription Factor 7-like 2 variant rs7903146
- (2014) Robert Wagner et al. Scientific Reports
- Shorthand notation for lipid structures derived from mass spectrometry
- (2013) Gerhard Liebisch et al. JOURNAL OF LIPID RESEARCH
- DMSO enhances electrospray response, boosting sensitivity of proteomic experiments
- (2013) Hannes Hahne et al. NATURE METHODS
- LipidHome: A Database of Theoretical Lipids Optimized for High Throughput Mass Spectrometry Lipidomics
- (2013) Joseph M. Foster et al. PLoS One
- Comprehensive Lipidome Profiling of Isogenic Primary and Metastatic Colon Adenocarcinoma Cell Lines
- (2012) Cassie J. Fhaner et al. ANALYTICAL CHEMISTRY
- FAT SIGNALS - Lipases and Lipolysis in Lipid Metabolism and Signaling
- (2012) Rudolf Zechner et al. Cell Metabolism
- A Ceramide-Centric View of Insulin Resistance
- (2012) Jose A. Chavez et al. Cell Metabolism
- Shotgun lipidomics on a LTQ Orbitrap mass spectrometer by successive switching between acquisition polarity modes
- (2012) Kai Schuhmann et al. JOURNAL OF MASS SPECTROMETRY
- TiSH — a robust and sensitive global phosphoproteomics strategy employing a combination of TiO2, SIMAC, and HILIC
- (2012) Kasper Engholm-Keller et al. Journal of Proteomics
- Targeted Proteomics of the Eicosanoid Biosynthetic Pathway Completes an Integrated Genomics-Proteomics-Metabolomics Picture of Cellular Metabolism
- (2012) Eduard Sabidó et al. MOLECULAR & CELLULAR PROTEOMICS
- Effects of diet and development on the Drosophila lipidome
- (2012) Maria Carvalho et al. Molecular Systems Biology
- A positive/negative ion–switching, targeted mass spectrometry–based metabolomics platform for bodily fluids, cells, and fresh and fixed tissue
- (2012) Min Yuan et al. Nature Protocols
- LipidXplorer: A Software for Consensual Cross-Platform Lipidomics
- (2012) Ronny Herzog et al. PLoS One
- Consecutive Positive Feedback Loops Create a Bistable Switch that Controls Preadipocyte-to-Adipocyte Conversion
- (2012) Byung Ouk Park et al. Cell Reports
- Universal and Confident Phosphorylation Site Localization Using phosphoRS
- (2011) Thomas Taus et al. JOURNAL OF PROTEOME RESEARCH
- Systematic and quantitative comparison of digest efficiency and specificity reveals the impact of trypsin quality on MS-based proteomics
- (2011) Julia Maria Burkhart et al. Journal of Proteomics
- Global quantification of mammalian gene expression control
- (2011) Björn Schwanhäusser et al. NATURE
- ATGL-mediated fat catabolism regulates cardiac mitochondrial function via PPAR-α and PGC-1
- (2011) Guenter Haemmerle et al. NATURE MEDICINE
- SearchGUI: An open-source graphical user interface for simultaneous OMSSA and X!Tandem searches
- (2011) Marc Vaudel et al. PROTEOMICS
- A novel informatics concept for high-throughput shotgun lipidomics based on the molecular fragmentation query language
- (2011) Ronny Herzog et al. GENOME BIOLOGY
- Comparative Epigenomic Analysis of Murine and Human Adipogenesis
- (2010) Tarjei S. Mikkelsen et al. CELL
- Characterization of OP9 as authentic mesenchymal stem cell line
- (2010) Jiao Gao et al. Journal of Genetics and Genomics
- Biochemistry, physiology, and genetics of GPAT, AGPAT, and lipin enzymes in triglyceride synthesis
- (2009) Kazuharu Takeuchi et al. AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM
- Molecular Mechanisms of Hepatic Steatosis and Insulin Resistance in the AGPAT2-Deficient Mouse Model of Congenital Generalized Lipodystrophy
- (2009) Víctor A. Cortés et al. Cell Metabolism
- Reactive Oxygen Species Facilitate Adipocyte Differentiation by Accelerating Mitotic Clonal Expansion
- (2009) Haemi Lee et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
- (2009) Bryson D Bennett et al. Nature Chemical Biology
- Universal sample preparation method for proteome analysis
- (2009) Jacek R Wiśniewski et al. NATURE METHODS
- Metabolic phenotyping of a model of adipocyte differentiation
- (2009) Lee D. Roberts et al. PHYSIOLOGICAL GENOMICS
- Metabolomics Reveals Metabolic Biomarkers of Crohn's Disease
- (2009) Janet Jansson et al. PLoS One
- XCMS2: Processing Tandem Mass Spectrometry Data for Metabolite Identification and Structural Characterization
- (2008) H. P. Benton et al. ANALYTICAL CHEMISTRY
- Direct interaction between the inhibitor 2 and ceramide via sphingolipid-protein binding is involved in the regulation of protein phosphatase 2A activity and signaling
- (2008) Archana Mukhopadhyay et al. FASEB JOURNAL
- Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics
- (2008) Vitali Matyash et al. JOURNAL OF LIPID RESEARCH
- Temporal Profiling of the Adipocyte Proteome during Differentiation Using a Five-Plex SILAC Based Strategy
- (2008) Henrik Molina et al. JOURNAL OF PROTEOME RESEARCH
- Ceramide induces p38 MAPK-dependent apoptosis and Bax translocation via inhibition of Akt in HL-60 cells
- (2007) Hae Jong Kim et al. CANCER LETTERS
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started