The first chromosome‐level genome assembly and transcriptome sequencing provide insights into cantharidin production of the blister beetles

The draft genome of the Tibetan partridge (Perdix hodgsoniae) provides insights into its phylogenetic position and high-altitude adaptation

(2022) Chuang Zhou et al.   JOURNAL OF HEREDITY

Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm

(2021) Haoyu Cheng et al.   NATURE METHODS

De novo transcriptome assemblies of Epicauta tibialis provide insights into the sexual dimorphism in the production of cantharidin

(2021) Chao Du et al.   ARCHIVES OF INSECT BIOCHEMISTRY AND PHYSIOLOGY

Unraveling the role of male reproductive tract and haemolymph in cantharidin-exuding Lydus trimaculatus and Mylabris variabilis (Coleoptera: Meloidae): a comparative transcriptomics approach

(2021) Emiliano Fratini et al.   BMC GENOMICS

Involvement of CYP2 and mitochondrial clan P450s of Helicoverpa armigera in xenobiotic metabolism

(2021) Yu Shi et al.   INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY

Draft genome of the blister beetle, Epicauta chinensis

(2021) Xing Tian et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Draft Genome of a Blister Beetle Mylabris aulica

(2020) De-Long Guan et al.   Frontiers in Genetics

Chromosome conformation capture resolved near complete genome assembly of broomcorn millet

(2019) Junpeng Shi et al.   Nature Communications

Genome-wide analysis reveals the genomic features of the turkey vulture (Cathartes aura) as a scavenger

(2019) Chuang Zhou et al.   MOLECULAR GENETICS AND GENOMICS

Genomic content of chemosensory genes correlates with host range in wood-boring beetles (Dendroctonus ponderosae, Agrilus planipennis, and Anoplophora glabripennis)

(2019) Martin N. Andersson et al.   BMC GENOMICS

Characterized cantharidin distribution and related gene expression patterns in tissues of blister beetles, Epicauta chinensis

(2017) Ming Jiang et al.   Insect Science

De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds

(2017) Olga Dudchenko et al.   SCIENCE

W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis

(2016) Jana Trifinopoulos et al.   NUCLEIC ACIDS RESEARCH

De Novo Transcriptome and Expression Profile Analysis to Reveal Genes and Pathways Potentially Involved in Cantharidin Biosynthesis in the Blister Beetle Mylabris cichorii

(2016) Yi Huang et al.   PLoS One

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

Sex-specific consequences of an induced immune response on reproduction in a moth

(2015) Andrea Barthel et al.   BMC EVOLUTIONARY BIOLOGY

Comparative Analysis of Transposable Elements Highlights Mobilome Diversity and Evolution in Vertebrates

(2015) Domitille Chalopin et al.   Genome Biology and Evolution

3-hydroxy-3-methyl glutaryl coenzyme A reductase: an essential actor in the biosynthesis of cantharidin in the blister beetleEpicauta chinensisLaporte

(2015) S. Lü et al.   INSECT MOLECULAR BIOLOGY

Seeing is believing: Dynamic evolution of gene families

(2015) Rayna M. Harris et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Detoxification and stress response genes expressed in a western North American bumble bee, Bombus huntii (Hymenoptera: Apidae)

(2013) Junhuan Xu et al.   BMC GENOMICS

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Hi–C: A comprehensive technique to capture the conformation of genomes

(2012) Jon-Matthew Belton et al.   METHODS

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

A scaling normalization method for differential expression analysis of RNA-seq data

(2010) Mark D Robinson et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

(2008) Brian J Haas et al.   GENOME BIOLOGY