Optimal Supervised Reduction of High Dimensional Transcription Data

A review of UMAP in population genetics

(2020) Alex Diaz-Papkovich et al.   JOURNAL OF HUMAN GENETICS

Advanced NSCLC patients with high IL-6 levels have altered peripheral T cell population and signaling

(2019) Shawn J. Rice et al.   LUNG CANCER

Integrated analysis reveals five potential ceRNA biomarkers in human lung adenocarcinoma

(2019) Yu Liu et al.   PeerJ

Integrated Network Analysis Reveals FOXM1 and MYBL2 as Key Regulators of Cell Proliferation in Non-small Cell Lung Cancer

(2019) Firoz Ahmed   Frontiers in Oncology

SPP1 and AGER as potential prognostic biomarkers for lung adenocarcinoma

(2018) Weiguo Zhang et al.   Oncology Letters

A Review of Matched-pairs Feature Selection Methods for Gene Expression Data Analysis

(2018) Sen Liang et al.   Computational and Structural Biotechnology Journal

Dimensionality reduction for visualizing single-cell data using UMAP

(2018) Etienne Becht et al.   NATURE BIOTECHNOLOGY

Visualizing and Interpreting Single-Cell Gene Expression Datasets with Similarity Weighted Nonnegative Embedding

(2018) Yan Wu et al.   Cell Systems

Clinical verification of plasma messenger RNA as novel noninvasive biomarker identified through bioinformatics analysis for lung cancer

(2017) Dan Zhou et al.   Oncotarget

Sparse Fisher's linear discriminant analysis for partially labeled data

(2017) Qiyi Lu et al.   Statistical Analysis and Data Mining

High systemic IL-6 is associated with worse prognosis in patients with non-small cell lung cancer

(2017) Estela Maria Silva et al.   PLoS One

Interleukin-6 blockade attenuates lung cancer tissue construction integrated by cancer stem cells

(2017) Hiroyuki Ogawa et al.   Scientific Reports

Principal component analysis for designed experiments

(2015) Tomokazu Konishi   BMC BIOINFORMATICS

Glutathione and Thioredoxin Antioxidant Pathways Synergize to Drive Cancer Initiation and Progression

(2015) Isaac S. Harris et al.   CANCER CELL

Interleukin-6 Prevents the Initiation but Enhances the Progression of Lung Cancer

(2015) Z. Qu et al.   CANCER RESEARCH

Algorithms and tools for protein–protein interaction networks clustering, with a special focus on population-based stochastic methods

(2014) Clara Pizzuti et al.   BIOINFORMATICS

The good, the bad, and the ugly of interleukin-6 signaling

(2014) J. J. Fuster et al.   EMBO JOURNAL

Mutual Information between Discrete and Continuous Data Sets

(2014) Brian C. Ross   PLoS One

Gene Expression Classification of Colon Cancer into Molecular Subtypes: Characterization, Validation, and Prognostic Value

(2013) Laetitia Marisa et al.   PLOS MEDICINE

Comparing the dimensionality reduction methods in gene expression databases

(2012) Helyane Bronoski Borges et al.   EXPERT SYSTEMS WITH APPLICATIONS

Integrating Factor Analysis and a Transgenic Mouse Model to Reveal a Peripheral Blood Predictor of Breast Tumors

(2011) Heather G LaBreche et al.   BMC Medical Genomics

Identification of a Novel Biomarker, SEMA5A, for Non-Small Cell Lung Carcinoma in Nonsmoking Women

(2010) T.-P. Lu et al.   CANCER EPIDEMIOLOGY BIOMARKERS & PREVENTION

Genetic programming for anticancer therapeutic response prediction using the NCI-60 dataset

(2009) Francesco Archetti et al.   COMPUTERS & OPERATIONS RESEARCH

An efficient approach for building customer profiles from business data

(2009) L.B. Romdhane et al.   EXPERT SYSTEMS WITH APPLICATIONS