Self-grafting-induced epigenetic changes leading to drought stress tolerance in tomato plants

Comparative Transcriptome Analysis of Grafted Tomato with Drought Tolerance

(2022) Maria Isabel Fuentes-Merlos et al.   Plants-Basel

Vegetable Grafting From a Molecular Point of View: The Involvement of Epigenetics in Rootstock-Scion Interactions

(2021) Aphrodite Tsaballa et al.   Frontiers in Plant Science

Epigenetic Mechanisms of Plant Adaptation to Biotic and Abiotic Stresses

(2020) Vasily V. Ashapkin et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Modulation of cell cycle progression and chromatin dynamic as tolerance mechanisms to salinity and drought stress in maize

(2020) Khaled Y. Kamal et al.   PHYSIOLOGIA PLANTARUM

In-silico study of biotic and abiotic stress-related transcription factor binding sites in the promoter regions of rice germin-like protein genes

(2019) Arpita Das et al.   PLoS One

Phytohormone and Chromatin Crosstalk: The Missing Link For Developmental Plasticity?

(2019) Stéphane Maury et al.   Frontiers in Plant Science

Transcriptome dynamics atArabidopsisgraft junctions reveal an intertissue recognition mechanism that activates vascular regeneration

(2018) Charles W. Melnyk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools

(2018) Huaiyu Mi et al.   NUCLEIC ACIDS RESEARCH

The role of plant hormones during grafting

(2017) Amrit K. Nanda et al.   JOURNAL OF PLANT RESEARCH

Wounding Triggers Callus Formation via Dynamic Hormonal and Transcriptional Changes

(2017) Momoko Ikeuchi et al.   PLANT PHYSIOLOGY

Vegetable Grafting as a Tool to Improve Drought Resistance and Water Use Efficiency

(2017) Pradeep Kumar et al.   Frontiers in Plant Science

Vegetable Grafting: The Implications of a Growing Agronomic Imperative for Vegetable Fruit Quality and Nutritive Value

(2017) Marios C. Kyriacou et al.   Frontiers in Plant Science

Plant hormone-mediated regulation of stress responses

(2016) Vivek Verma et al.   BMC PLANT BIOLOGY

Differential Cellular Control by Cotyledon-Derived Phytohormones Involved in Graft Reunion of Arabidopsis Hypocotyls

(2016) Keita Matsuoka et al.   PLANT AND CELL PHYSIOLOGY

ABA receptor PYL9 promotes drought resistance and leaf senescence

(2016) Yang Zhao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Role and Regulation of ABI5 (ABA-Insensitive 5) in Plant Development, Abiotic Stress Responses and Phytohormone Crosstalk

(2016) Anna Skubacz et al.   Frontiers in Plant Science

Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics

(2016) P. A. Crisp et al.   Science Advances

A Developmental Framework for Graft Formation and Vascular Reconnection in Arabidopsis thaliana

(2015) Charles W. Melnyk et al.   CURRENT BIOLOGY

Control of plant cell differentiation by histone modification and DNA methylation

(2015) Momoko Ikeuchi et al.   CURRENT OPINION IN PLANT BIOLOGY

Involvement of DNA methylation in the control of cell growth during heat stress in tobacco BY-2 cells

(2015) Isabella Centomani et al.   PROTOPLASMA

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Chromatin meets the cell cycle

(2014) Cécile Raynaud et al.   JOURNAL OF EXPERIMENTAL BOTANY

H3K27me3 and H3K4me3 Chromatin Environment at Super-Induced Dehydration Stress Memory Genes of Arabidopsis thaliana

(2014) Ning Liu et al.   Molecular Plant

Optimization of crop productivity in tomato using induced mutations in the florigen pathway

(2014) Soon Ju Park et al.   NATURE GENETICS

Differential Methylation during Maize Leaf Growth Targets Developmentally Regulated Genes

(2014) J. Candaele et al.   PLANT PHYSIOLOGY

Guidelines to use tomato in experiments with a controlled environment

(2014) Dietmar Schwarz et al.   Frontiers in Plant Science

Plant grafting: new mechanisms, evolutionary implications

(2014) Eliezer E. Goldschmidt   Frontiers in Plant Science

Response of plants to water stress

(2014) Yuriko Osakabe et al.   Frontiers in Plant Science

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Plant Callus: Mechanisms of Induction and Repression

(2013) M. Ikeuchi et al.   PLANT CELL

Inter-Species Grafting Caused Extensive and Heritable Alterations of DNA Methylation in Solanaceae Plants

(2013) Rui Wu et al.   PLoS One

Epigenetic responses to drought stress in rice (Oryza sativa L.)

(2013) Gayacharan et al.   PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS

The tomato genome sequence provides insights into fleshy fruit evolution

(2012)   NATURE

Multiple exposures to drought 'train' transcriptional responses in Arabidopsis

(2012) Yong Ding et al.   Nature Communications

Using Drosophila melanogaster as a Model for Genotoxic Chemical Mutational Studies with a New Program, SnpSift

(2012) Pablo Cingolani et al.   Frontiers in Genetics

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

(2011) H. Li   BIOINFORMATICS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Drought-induced site-specific DNA methylation and its association with drought tolerance in rice (Oryza sativa L.)

(2010) Wen-Sheng Wang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Box H/ACA Small Ribonucleoproteins

(2010) Tamás Kiss et al.   MOLECULAR CELL

Protocol: fine-tuning of a Chromatin Immunoprecipitation (ChIP) protocol in tomato

(2010) Martiniano M Ricardi et al.   Plant Methods

Conservation and divergence of methylation patterning in plants and animals

(2010) S. Feng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hormonal signaling in rootstock–scion interactions

(2010) B. Aloni et al.   SCIENTIA HORTICULTURAE

Grafting as a tool to improve tolerance of vegetables to abiotic stresses: Thermal stress, water stress and organic pollutants

(2010) Dietmar Schwarz et al.   SCIENTIA HORTICULTURAE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Thigmomorphogenesis: a complex plant response to mechano-stimulation

(2008) E. W. Chehab et al.   JOURNAL OF EXPERIMENTAL BOTANY

An efficient chromatin immunoprecipitation (ChIP) protocol for studying histone modifications in Arabidopsis plants

(2008) Abdelaty Saleh et al.   Nature Protocols

Alterations of Lysine Modifications on the Histone H3 N-Tail under Drought Stress Conditions in Arabidopsis thaliana

(2008) Jong-Myong Kim et al.   PLANT AND CELL PHYSIOLOGY

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY