Single-cell RNA sequencing of bronchoscopy specimens: development of a rapid minimal handling protocol

Airway basal cells show a dedifferentiated KRT17highPhenotype and promote fibrosis in idiopathic pulmonary fibrosis

(2022) Benedikt Jaeger et al.   Nature Communications

Inhaled corticosteroids downregulate SARS-CoV-2-related genes in COPD: results from a RCT

(2021) Stephen Milne et al.   EUROPEAN RESPIRATORY JOURNAL

Effects of Inhaled Corticosteroid/long-acting beta-2 Agonist Combination on the Airway Microbiome of Patients with COPD: A Randomized Controlled Trial (DISARM)

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ACE-2 expression in the small airway epithelia of smokers and COPD patients: implications for COVID-19

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More Than Just a Barrier: The Immune Functions of the Airway Epithelium in Asthma Pathogenesis

(2020) Andreas Frey et al.   Frontiers in Immunology

A Single-cell Atlas of the Human Healthy Airways

(2020) Marie Deprez et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

COVID-19 severity correlates with airway epithelium–immune cell interactions identified by single-cell analysis

(2020) Robert Lorenz Chua et al.   NATURE BIOTECHNOLOGY

Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq

(2020) Bo Li et al.   NATURE METHODS

SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data

(2020) Matthew D Young et al.   GigaScience

A cellular census of human lungs identifies novel cell states in health and in asthma

(2019) Felipe A. Vieira Braga et al.   NATURE MEDICINE

Systematic analysis of transcriptomic profiles of COPD airway epithelium using next-generation sequencing and bioinformatics

(2018) Wei-An Chang et al.   International Journal of Chronic Obstructive Pulmonary Disease

Best Practices for Preparing a Single Cell Suspension from Solid Tissues for Flow Cytometry

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Characterizing the Impact of Smoking and Lung Cancer on the Airway Transcriptome Using RNA-Seq

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Current smoking-specific gene expression signature in normal bronchial epithelium is enhanced in squamous cell lung cancer

(2009) Mirjam C Boelens et al.   JOURNAL OF PATHOLOGY

Efficient propagation of single cells accutase-dissociated human embryonic stem cells

(2007) Ruchi Bajpai et al.   MOLECULAR REPRODUCTION AND DEVELOPMENT