A computer vision and residual neural network (ResNet) combined method for automated and accurate yeast replicative aging analysis of high-throughput microfluidic single-cell images

DetecDiv, a generalist deep-learning platform for automated cell division tracking and survival analysis

(2022) Théo Aspert et al.   eLife

Complementary performances of convolutional and capsule neural networks on classifying microfluidic images of dividing yeast cells

(2021) Mehran Ghafari et al.   PLoS One

Microscopic Image Segmentation and Morphological Characterization of Novel Chitosan/Silica Nanoparticle/Nisin Films Using Antimicrobial Technique for Blueberry Preservation

(2021) Rokayya Sami et al.   Membranes

Microdroplet enabled cultivation of single yeast cells correlates with bulk growth and reveals subpopulation phenomena

(2020) Hangrui Liu et al.   BIOTECHNOLOGY AND BIOENGINEERING

Cellpose: a generalist algorithm for cellular segmentation

(2020) Carsen Stringer et al.   NATURE METHODS

YeastSpotter: Accurate and parameter-free web segmentation for microscopy images of yeast cells

(2019) Alex X Lu et al.   BIOINFORMATICS

Estimating network changes from lifespan measurements using a parsimonious gene network model of cellular aging

(2019) Hong Qin   BMC BIOINFORMATICS

Multiple inputs ensure yeast cell size homeostasis during cell cycle progression

(2018) Cecilia Garmendia-Torres et al.   eLife

Automated analysis of high‐content microscopy data with deep learning

(2017) Oren Z Kraus et al.   Molecular Systems Biology

Accurate Classification of Protein Subcellular Localization from High-Throughput Microscopy Images Using Deep Learning

(2017) Tanel Pärnamaa et al.   G3-Genes Genomes Genetics

Quantitative characterization of the auxin-inducible degron: a guide for dynamic protein depletion in single yeast cells

(2017) Alexandros Papagiannakis et al.   Scientific Reports

Microfluidic Platforms for Yeast-Based Aging Studies

(2016) Myeong Chan Jo et al.   Small

High-throughput analysis of yeast replicative aging using a microfluidic system

(2015) Myeong Chan Jo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Yeast Replicator: A High-Throughput Multiplexed Microfluidics Platform for Automated Measurements of Single-Cell Aging

(2015) Ping Liu et al.   Cell Reports

A Microfluidic System for Studying Ageing and Dynamic Single-Cell Responses in Budding Yeast

(2014) Matthew M. Crane et al.   PLoS One

Calorie restriction does not elicit a robust extension of replicative lifespan in Saccharomyces cerevisiae

(2014) D. H. E. W. Huberts et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Construction and use of a microfluidic dissection platform for long-term imaging of cellular processes in budding yeast

(2013) Daphne H E W Huberts et al.   Nature Protocols

Aging Yeast Cells Undergo a Sharp Entry into Senescence Unrelated to the Loss of Mitochondrial Membrane Potential

(2013) Steffen Fehrmann et al.   Cell Reports

Molecular phenotyping of aging in single yeast cells using a novel microfluidic device

(2012) Zhengwei Xie et al.   AGING CELL

Whole lifespan microscopic observation of budding yeast aging through a microfluidic dissection platform

(2012) S. S. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative analysis of gene expression and regulation of replicative aging associated genes in S. cerevisiae

(2010) Sukhraj Pal Singh Dhami et al.   Molecular BioSystems