Comparative genomics hints at dispensability of multiple essential genes in two Escherichia coli L-form strains

Genome-wide CRISPRi screen identifies enhanced autolithotrophic phenotypes in acetogenic bacterium Eubacterium limosum

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CleanSeq: A Pipeline for Contamination Detection, Cleanup, and Mutation Verifications from Microbial Genome Sequencing Data

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A bacterial pan-genome makes gene essentiality strain-dependent and evolvable

(2022) Federico Rosconi et al.   Nature Microbiology

The impact of genetic diversity on gene essentiality within the Escherichia coli species

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Exploring a Local Genetic Interaction Network Using Evolutionary Replay Experiments

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CryoEM structure of the antibacterial target PBP1b at 3.3 Å resolution

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The EcoCyc Database in 2021

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The human tumor microbiome is composed of tumor type–specific intracellular bacteria

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Essential metabolism for a minimal cell

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L form bacteria growth in low-osmolality medium

(2019) Masaki Osawa et al.   MICROBIOLOGY-SGM

Defining the core essential genome of Pseudomonas aeruginosa

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Crucial role for central carbon metabolism in the bacterial L-form switch and killing by β-lactam antibiotics

(2019) Yoshikazu Kawai et al.   Nature Microbiology

Systematic identification of metabolites controlling gene expression in E. coli

(2019) Martin Lempp et al.   Nature Communications

Possible role of L-form switching in recurrent urinary tract infection

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The Essential Genome of Escherichia coli K-12

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Deep generative models of genetic variation capture the effects of mutations

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Predicting the evolution of Escherichia coli by a data-driven approach

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Genome-wide CRISPR-dCas9 screens in E. coli identify essential genes and phage host factors

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High‐throughput CRISPRi phenotyping identifies new essential genes in Streptococcus pneumoniae

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Escherichia coli DNA ligase B may mitigate damage from oxidative stress

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Proliferation of Listeria monocytogenes L-form cells by formation of internal and external vesicles

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Wall proficient E. coli capable of sustained growth in the absence of the Z-ring division machine

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Cell Growth of Wall-Free L-Form Bacteria Is Limited by Oxidative Damage

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Membrane Topology and Biochemical Characterization of the Escherichia coli BacA Undecaprenyl-Pyrophosphate Phosphatase

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Crystal Structure of Penicillin-Binding Protein 3 (PBP3) from Escherichia coli

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Excess Membrane Synthesis Drives a Primitive Mode of Cell Proliferation

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DEG 10, an update of the database of essential genes that includes both protein-coding genes and noncoding genomic elements: Table 1.

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How did bacterial ancestors reproduce? Lessons from L-form cells and giant lipid vesicles

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Intracellular Vesicles as Reproduction Elements in Cell Wall-Deficient L-Form Bacteria

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Rate and molecular spectrum of spontaneous mutations in the bacterium Escherichia coli as determined by whole-genome sequencing

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In Vivo-Validated Essential Genes Identified in Acinetobacter baumannii by Using Human Ascites Overlap Poorly with Essential Genes Detected on Laboratory Media

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Escherichia coli Peptide Binding Protein OppA Has a Preference for Positively Charged Peptides

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Structure of Escherichia coli Succinate:Quinone Oxidoreductase with an Occupied and Empty Quinone-binding Site

(2009) Jonathan Ruprecht et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Predicting essential genes based on network and sequence analysis

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Listeria monocytogenesl-forms respond to cell wall deficiency by modifying gene expression and the mode of division

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Life without a wall or division machine in Bacillus subtilis

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Genome evolution and adaptation in a long-term experiment with Escherichia coli

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Insights into the Molecular Basis of L-Form Formation and Survival in Escherichia coli

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Identifying essential genes inEscherichia colifrom a metabolic optimization principle

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Are essential genes really essential?

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STRING 8--a global view on proteins and their functional interactions in 630 organisms

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