Spatial and temporal dynamics of coastal benthic microbial communities along a salinity gradient
出版年份 2023 全文链接
标题
Spatial and temporal dynamics of coastal benthic microbial communities along a salinity gradient
作者
关键词
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出版物
AQUATIC MICROBIAL ECOLOGY
Volume 89, Issue -, Pages 127-142
出版商
Inter-Research Science Center
发表日期
2023-07-17
DOI
10.3354/ame02002
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Ranking the biases: The choice of OTUs vs. ASVs in 16S rRNA amplicon data analysis has stronger effects on diversity measures than rarefaction and OTU identity threshold
- (2022) Marlène Chiarello et al. PLoS One
- Microbial functional genes are driven by gradients in sediment stoichiometry, oxygen, and salinity across the Baltic benthic ecosystem
- (2022) Elias Broman et al. Microbiome
- Diversity and ecology of protists revealed by metabarcoding
- (2021) Fabien Burki et al. CURRENT BIOLOGY
- Temporal Variability and Ecological Interactions of Parasitic Marine Syndiniales in Coastal Protist Communities
- (2020) Sean R. Anderson et al. mSphere
- Insights into the earthworm gut multi-kingdom microbial communities
- (2020) Rumakanta Sapkota et al. SCIENCE OF THE TOTAL ENVIRONMENT
- Bacterioplankton dynamics driven by interannual and spatial variation in diatom and dinoflagellate spring bloom communities in the Baltic Sea
- (2020) María Teresa Camarena‐Gómez et al. LIMNOLOGY AND OCEANOGRAPHY
- Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems
- (2020) David Singer et al. ENVIRONMENT INTERNATIONAL
- Active bacterial and archaeal communities in coastal sediments: Biogeography pattern, assembly process and co-occurrence relationship
- (2020) Mingyue Li et al. SCIENCE OF THE TOTAL ENVIRONMENT
- High Frequency Multi-Year Variability in Baltic Sea Microbial Plankton Stocks and Activities
- (2019) Carina Bunse et al. Frontiers in Microbiology
- Seasonality of Planktonic Freshwater Ciliates: Are Analyses Based on V9 Regions of the 18S rRNA Gene Correlated With Morphospecies Counts?
- (2019) Gianna Pitsch et al. Frontiers in Microbiology
- Phytoplankton species richness along coastal and estuarine salinity continua
- (2019) Kalle Olli et al. AMERICAN NATURALIST
- Diversity patterns of benthic bacterial communities along the salinity continuum of the Humber estuary (UK)
- (2018) A Vidal-Durà et al. AQUATIC MICROBIAL ECOLOGY
- Benthic Bacterial Community Composition in the Oligohaline-Marine Transition of Surface Sediments in the Baltic Sea Based on rRNA Analysis
- (2018) Julia Klier et al. Frontiers in Microbiology
- EukRef: Phylogenetic curation of ribosomal RNA to enhance understanding of eukaryotic diversity and distribution
- (2018) Javier del Campo et al. PLOS BIOLOGY
- A fundamental difference between macrobiota and microbial eukaryotes: Protistan plankton has a species maximum in the freshwater‐marine transition zone of the Baltic Sea
- (2018) Sabine Filker et al. ENVIRONMENTAL MICROBIOLOGY
- Protist Diversity and Seasonal Dynamics in Skagerrak Plankton Communities as Revealed by Metabarcoding and Microscopy
- (2018) Sandra Gran-Stadniczeñko et al. JOURNAL OF EUKARYOTIC MICROBIOLOGY
- Are We Overestimating Protistan Diversity in Nature?
- (2018) David A. Caron et al. TRENDS IN MICROBIOLOGY
- The diversity and biogeography of abundant and rare intertidal marine microeukaryotes explained by environment and dispersal limitation
- (2017) Wenjing Zhang et al. ENVIRONMENTAL MICROBIOLOGY
- A practical method for barcoding and size-trimming PCR templates for amplicon sequencing
- (2016) Anita Mäki et al. BIOTECHNIQUES
- Algae–bacteria interactions: Evolution, ecology and emerging applications
- (2016) Rishiram Ramanan et al. BIOTECHNOLOGY ADVANCES
- Global biogeography of marine fungi is shaped by the environment
- (2016) Kaho H. Tisthammer et al. Fungal Ecology
- Salinity is the major factor influencing the sediment bacterial communities in a Mediterranean lagoonal complex (Amvrakikos Gulf, Ionian Sea)
- (2016) Christina Pavloudi et al. Marine Genomics
- Diversity of Pico- to Mesoplankton along the 2000 km Salinity Gradient of the Baltic Sea
- (2016) Yue O. O. Hu et al. Frontiers in Microbiology
- Phylogenetic Signals of Salinity and Season in Bacterial Community Composition Across the Salinity Gradient of the Baltic Sea
- (2016) Daniel P. R. Herlemann et al. Frontiers in Microbiology
- VSEARCH: a versatile open source tool for metagenomics
- (2016) Torbjørn Rognes et al. PeerJ
- Bacterial community structure and function shift along a successional series of tidal flats in the Yellow River Delta
- (2016) Xiaofei Lv et al. Scientific Reports
- Microbial metagenomics in the Baltic Sea: Recent advancements and prospects for environmental monitoring
- (2015) Karolina Ininbergs et al. AMBIO
- Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing
- (2015) Ramon Massana et al. ENVIRONMENTAL MICROBIOLOGY
- Seasonal patterns of bacterial communities in the coastal brackish sediments of the Gulf of Finland, Baltic Sea
- (2015) Adrien Vetterli et al. ESTUARINE COASTAL AND SHELF SCIENCE
- Functional Tradeoffs Underpin Salinity-Driven Divergence in Microbial Community Composition
- (2014) Chris L. Dupont et al. PLoS One
- Consumer co-evolution as an important component of the eco-evolutionary feedback
- (2014) Teppo Hiltunen et al. Nature Communications
- Top-down controls on bacterial community structure: microbial network analysis of bacteria, T4-like viruses and protists
- (2013) Cheryl-Emiliane T Chow et al. ISME Journal
- The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
- (2013) Pelin Yilmaz et al. NUCLEIC ACIDS RESEARCH
- phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
- (2013) Paul J. McMurdie et al. PLoS One
- Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient
- (2012) Barbara J Campbell et al. ISME Journal
- The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
- (2012) Laure Guillou et al. NUCLEIC ACIDS RESEARCH
- Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea
- (2011) Daniel PR Herlemann et al. ISME Journal
- Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness
- (2011) Virginia Edgcomb et al. ISME Journal
- Metagenetic community analysis of microbial eukaryotes illuminates biogeographic patterns in deep-sea and shallow water sediments
- (2011) HOLLY M. BIK et al. MOLECULAR ECOLOGY
- Arctic Ocean Microbial Community Structure before and after the 2007 Record Sea Ice Minimum
- (2011) André M. Comeau et al. PLoS One
- Ecological assessment of estuarine sediments by pyrosequencing eukaryotic ribosomal DNA
- (2010) Anthony A Chariton et al. FRONTIERS IN ECOLOGY AND THE ENVIRONMENT
- Patterns of fungal diversity and composition along a salinity gradient
- (2010) Devon J Mohamed et al. ISME Journal
- Revisiting Remane’s concept: evidence for high plankton diversity and a protistan species maximum in the horohalinicum of the Baltic Sea
- (2010) IV Telesh et al. MARINE ECOLOGY PROGRESS SERIES
- Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
- (2009) P. D. Schloss et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Infrequent marine–freshwater transitions in the microbial world
- (2009) Ramiro Logares et al. TRENDS IN MICROBIOLOGY
- Complex interactions in the microbial world: underexplored key links between viruses, bacteria and protozoan grazers in aquatic environments
- (2008) T Miki et al. AQUATIC MICROBIAL ECOLOGY
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