Length-independent structural similarities enrich the antibody CDR canonical class model

AbDesign: An algorithm for combinatorial backbone design guided by natural conformations and sequences

(2015) Gideon D. Lapidoth et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

The Origin of CDR H3 Structural Diversity

(2015) Brian D. Weitzner et al.   STRUCTURE

The promise and challenge of high-throughput sequencing of the antibody repertoire

(2014) George Georgiou et al.   NATURE BIOTECHNOLOGY

In-depth determination and analysis of the human paired heavy- and light-chain antibody repertoire

(2014) Brandon J DeKosky et al.   NATURE MEDICINE

PyIgClassify: a database of antibody CDR structural classifications

(2014) Jared Adolf-Bryfogle et al.   NUCLEIC ACIDS RESEARCH

OptMAVEn – A New Framework for the de novo Design of Antibody Variable Region Models Targeting Specific Antigen Epitopes

(2014) Tong Li et al.   PLoS One

Canonical structures of short CDR-L3 in antibodies

(2014) Alexey Teplyakov et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

A complete, multi-level conformational clustering of antibody complementarity-determining regions

(2014) Dimitris Nikoloudis et al.   PeerJ

SAbDab: the structural antibody database

(2013) James Dunbar et al.   NUCLEIC ACIDS RESEARCH

Location and length distribution of somatic hypermutation-associated DNA insertions and deletions reveals regions of antibody structural plasticity

(2012) B S Briney et al.   GENES AND IMMUNITY

Computer-aided antibody design

(2012) D. Kuroda et al.   PROTEIN ENGINEERING DESIGN & SELECTION

A database of immunoglobulins with integrated tools: DIGIT

(2011) A. Chailyan et al.   NUCLEIC ACIDS RESEARCH

Structural repertoire of immunoglobulin λ light chains

(2011) Anna Chailyan et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Antibody modeling assessment

(2011) Juan C. Almagro et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

A New Clustering of Antibody CDR Loop Conformations

(2010) Benjamin North et al.   JOURNAL OF MOLECULAR BIOLOGY

OptCDR: a general computational method for the design of antibody complementarity determining regions for targeted epitope binding

(2010) R. J. Pantazes et al.   PROTEIN ENGINEERING DESIGN & SELECTION

PIGS: automatic prediction of antibody structures

(2008) P. Marcatili et al.   BIOINFORMATICS

Systematic classification of CDR-L3 in antibodies: Implications of the light chain subtypes and the VL-VH interface

(2008) Daisuke Kuroda et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Structural classification of CDR-H3 revisited: A lesson in antibody modeling

(2008) Daisuke Kuroda et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS