Phylogenomics of the Olea europaea complex using 15 whole genomes supports recurrent genetic admixture together with differentiation into seven subspecies

Polyploidy on Islands: Its Emergence and Importance for Diversification

(2021) Heidi M. Meudt et al.   Frontiers in Plant Science

Phylogenomic and ecological analyses reveal the spatiotemporal evolution of global pines

(2021) Wei-Tao Jin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ATP‐binding cassette transporters in nonmodel plants

(2021) Joanna Banasiak et al.   NEW PHYTOLOGIST

Genomic evidence for recurrent genetic admixture during the domestication of Mediterranean olive trees (Olea europaea L.)

(2020) Irene Julca et al.   BMC BIOLOGY

Dsuite ‐ Fast D ‐statistics and related admixture evidence from VCF files

(2020) Milan Malinsky et al.   Molecular Ecology Resources

Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication

(2019) Muriel Gros‐Balthazard et al.   PLANT JOURNAL

Phylogenomics of the olive tree (Olea europaea) reveals the relative contribution of ancient allo- and autopolyploidization events

(2018) Irene Julca et al.   BMC BIOLOGY

Sphingolipid Distribution, Content and Gene Expression during Olive-Fruit Development and Ripening

(2018) Carla Inês et al.   Frontiers in Plant Science

Modulation of sphingolipid long-chain base composition and gene expression during early olive-fruit development, and putative role of brassinosteroid

(2018) Jorge Corbacho et al.   JOURNAL OF PLANT PHYSIOLOGY

Floral biology in Olea europaea subsp. cuspidata: A comparative structural and functional characterization

(2016) Maria Eugenia Caceres et al.   FLORA

Plant ABC Transporters Enable Many Unique Aspects of a Terrestrial Plant's Lifestyle

(2016) Jae-Ung Hwang et al.   Molecular Plant

Genome sequence of the olive tree, Olea europaea

(2016) Fernando Cruz et al.   GigaScience

Repetitive DNA and Plant Domestication: Variation in Copy Number and Proximity to Genes of LTR-Retrotransposons among Wild and Cultivated Sunflower (Helianthus annuus) Genotypes

(2015) Flavia Mascagni et al.   Genome Biology and Evolution

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Sequence analysis of single-copy genes in two wild olive subspecies: nucleotide diversity and potential use for testing admixture

(2014) G. Besnard et al.   GENOME

Olive domestication and diversification in the Mediterranean Basin

(2014) Concepcion M. Diez et al.   NEW PHYTOLOGIST

High Genetic Diversity Detected in Olives beyond the Boundaries of the Mediterranean Sea

(2014) Mehdi Hosseini-Mazinani et al.   PLoS One

Population genetics of Mediterranean and Saharan olives: geographic patterns of differentiation and evidence for early generations of admixture

(2013) G. Besnard et al.   ANNALS OF BOTANY

Interpretation of patterns of genetic variation in endemic plant species of oceanic islands

(2013) Tod F. Stuessy et al.   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

Intra-specific genetic diversity in wild olives (Olea europaea ssp cuspidata) in Hormozgan Province, Iran

(2012) Z. Noormohammadi et al.   GENETICS AND MOLECULAR RESEARCH

The Laperrine’s olive tree (Oleaceae): a wild genetic resource of the cultivated olive and a model-species for studying the biogeography of the Saharan Mountains

(2012) G. Besnard et al.   ACTA BOTANICA GALLICA

Genomic profiling of plastid DNA variation in the Mediterranean olive tree

(2011) Guillaume Besnard et al.   BMC PLANT BIOLOGY

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

(2011) Dent A. Earl et al.   Conservation Genetics Resources

Patterns and causes of incongruence between plastid and nuclear Senecioneae (Asteraceae) phylogenies

(2010) Pieter B. Pelser et al.   AMERICAN JOURNAL OF BOTANY

Bayesian island biogeography in a continental setting: the Rand Flora case

(2010) I. Sanmartin et al.   Biology Letters

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

A Draft Sequence of the Neandertal Genome

(2010) R. E. Green et al.   SCIENCE

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(2010) Masoud Sheidai et al.   SCIENCEASIA

Phylogenetics of Olea (Oleaceae) based on plastid and nuclear ribosomal DNA sequences: Tertiary climatic shifts and lineage differentiation times

(2009) Guillaume Besnard et al.   ANNALS OF BOTANY

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Coexistence of diploids and triploids in a Saharan relict olive: Evidence from nuclear microsatellite and flow cytometry analyses

(2009) Guillaume Besnard et al.   COMPTES RENDUS BIOLOGIES

Genetic diversity and differentiation processes in the ploidy series ofOlea europaeaL.: a multiscale approach from subspecies to insular populations

(2008) C. GARCÍA-VERDUGO et al.   MOLECULAR ECOLOGY

Worldwide Human Relationships Inferred from Genome-Wide Patterns of Variation

(2008) J. Z. Li et al.   SCIENCE