标题
Tensor decomposition discriminates tissues using scATAC-seq
作者
关键词
-
出版物
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
Volume 1867, Issue 6, Pages 130360
出版商
Elsevier BV
发表日期
2023-03-31
DOI
10.1016/j.bbagen.2023.130360
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Transcriptional heterogeneity of ventricular zone cells in the ganglionic eminences of the mouse forebrain
- (2022) Dongjin R Lee et al. eLife
- Chromatin accessibility profiling by ATAC-seq
- (2022) Fiorella C. Grandi et al. Nature Protocols
- scBasset: sequence-based modeling of single-cell ATAC-seq using convolutional neural networks
- (2022) Han Yuan et al. NATURE METHODS
- Evaluation of classification in single cell atac-seq data with machine learning methods
- (2022) Hongzhe Guo et al. BMC BIOINFORMATICS
- sciCAN: single-cell chromatin accessibility and gene expression data integration via cycle-consistent adversarial network
- (2022) Yang Xu et al. npj Systems Biology and Applications
- ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis
- (2021) Jeffrey M. Granja et al. NATURE GENETICS
- Comprehensive analysis of single cell ATAC-seq data with SnapATAC
- (2021) Rongxin Fang et al. Nature Communications
- Tensor-Decomposition-Based Unsupervised Feature Extraction in Single-Cell Multiomics Data Analysis
- (2021) Y-h. Taguchi et al. Genes
- ScLRTC: imputation for single-cell RNA-seq data via low-rank tensor completion
- (2021) Xiutao Pan et al. BMC GENOMICS
- Single-cell chromatin state analysis with Signac
- (2021) Tim Stuart et al. NATURE METHODS
- Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen
- (2021) Zhijian Li et al. Nature Communications
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion
- (2019) Ansuman T. Satpathy et al. NATURE BIOTECHNOLOGY
- SCALE method for single-cell ATAC-seq analysis via latent feature extraction
- (2019) Lei Xiong et al. Nature Communications
- Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
- (2016) Maxim V. Kuleshov et al. NUCLEIC ACIDS RESEARCH
- Single-cell chromatin accessibility reveals principles of regulatory variation
- (2015) Jason D. Buenrostro et al. NATURE
- Orchestrating high-throughput genomic analysis with Bioconductor
- (2015) Wolfgang Huber et al. NATURE METHODS
- NCBI GEO: archive for functional genomics data sets—update
- (2012) Tanya Barrett et al. NUCLEIC ACIDS RESEARCH
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