Periodic spatial patterning with a single morphogen

Synthetic multistability in mammalian cells

(2022) Ronghui Zhu et al.   SCIENCE

Mechanochemical Principles of Spatial and Temporal Patterns in Cells and Tissues

(2022) Anaïs Bailles et al.   Annual Review of Cell and Developmental Biology

Synthetic mammalian signaling circuits for robust cell population control

(2022) Yitong Ma et al.   CELL

De novo design of tyrosine and serine kinase-driven protein switches

(2021) Nicholas B. Woodall et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

An engineered protein-phosphorylation toggle network with implications for endogenous network discovery

(2021) Deepak Mishra et al.   SCIENCE

Pattern formation mechanisms of self-organizing reaction-diffusion systems

(2020) Amit N. Landge et al.   DEVELOPMENTAL BIOLOGY

Feather arrays are patterned by interacting signalling and cell density waves

(2019) William K. W. Ho et al.   PLOS BIOLOGY

Self-Organization in Pattern Formation

(2019) François Schweisguth et al.   DEVELOPMENTAL CELL

A Comprehensive Network Atlas Reveals That Turing Patterns Are Common but Not Robust

(2019) Natalie S. Scholes et al.   Cell Systems

Synthetic developmental biology: build and control multicellular systems

(2019) Mo R Ebrahimkhani et al.   CURRENT OPINION IN CHEMICAL BIOLOGY

A Comprehensive Network Atlas Reveals That Turing Patterns Are Common but Not Robust

(2019) Natalie S. Scholes et al.   Cell Systems

Morphogen gradient reconstitution reveals Hedgehog pathway design principles

(2018) Pulin Li et al.   SCIENCE

Programming self-organizing multicellular structures with synthetic cell-cell signaling

(2018) Satoshi Toda et al.   SCIENCE

Programmable protein circuits in living cells

(2018) Xiaojing J. Gao et al.   SCIENCE

Tales from the crypt: new insights into intestinal stem cells

(2018) Helmuth Gehart et al.   Nature Reviews Gastroenterology & Hepatology

Pattern dynamics of a Gierer–Meinhardt model with spatial effects

(2017) Gui-Quan Sun et al.   NONLINEAR DYNAMICS

Self-organized Notch dynamics generate stereotyped sensory organ patterns inDrosophila

(2017) Francis Corson et al.   SCIENCE

A Growing Stem Inhibits Bud Outgrowth – The Overlooked Theory of Apical Dominance

(2017) Tesfamichael H. Kebrom   Frontiers in Plant Science

Transcriptional and Post-transcriptional Gene Regulation by Long Non-coding RNA

(2017) Iain M. Dykes et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Engineering Customized Cell Sensing and Response Behaviors Using Synthetic Notch Receptors

(2016) Leonardo Morsut et al.   CELL

Persistence to anti-cancer treatments in the stationary to proliferating transition

(2016) Sivan Pearl Mizrahi et al.   CELL CYCLE

A new mechanism for spatial pattern formation via lateral and protrusion-mediated lateral signalling

(2016) Zena Hadjivasiliou et al.   Journal of the Royal Society Interface

Synchronous long-term oscillations in a synthetic gene circuit

(2016) Laurent Potvin-Trottier et al.   NATURE

The fin-to-limb transition as the re-organization of a Turing pattern

(2016) Koh Onimaru et al.   Nature Communications

High-throughput mathematical analysis identifies Turing networks for patterning with equally diffusing signals

(2016) Luciano Marcon et al.   eLife

Pattern Selection by Dynamical Biochemical Signals

(2015) David Palau-Ortin et al.   BIOPHYSICAL JOURNAL

Positional information and reaction-diffusion: two big ideas in developmental biology combine

(2015) J. B. A. Green et al.   DEVELOPMENT

Morphogen rules: design principles of gradient-mediated embryo patterning

(2015) J. Briscoe et al.   DEVELOPMENT

Orientation of Turing-like Patterns by Morphogen Gradients and Tissue Anisotropies

(2015) Tom W. Hiscock et al.   Cell Systems

Spatial trigger waves: positive feedback gets you a long way

(2014) Lendert Gelens et al.   MOLECULAR BIOLOGY OF THE CELL

The rise of regulatory RNA

(2014) Kevin V. Morris et al.   NATURE REVIEWS GENETICS

Digit patterning is controlled by a Bmp-Sox9-Wnt Turing network modulated by morphogen gradients

(2014) J. Raspopovic et al.   SCIENCE

Modeling Gene Expression Evolution with an Extended Ornstein–Uhlenbeck Process Accounting for Within-Species Variation

(2013) Rori V. Rohlfs et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Synthetic Biology Framework for Programming Eukaryotic Transcription Functions

(2012) Ahmad S. Khalil et al.   CELL

Optimality in the Development of Intestinal Crypts

(2012) Shalev Itzkovitz et al.   CELL

SnapShot: Spinal Cord Development

(2011) William A. Alaynick et al.   CELL

Scaling of morphogen gradients

(2011) Danny Ben-Zvi et al.   CURRENT OPINION IN GENETICS & DEVELOPMENT

Engineering the ABA Plant Stress Pathway for Regulation of Induced Proximity

(2011) F.-S. Liang et al.   Science Signaling

Mutual Inactivation of Notch Receptors and Ligands Facilitates Developmental Patterning

(2011) David Sprinzak et al.   PLoS Computational Biology

Dynamic Filopodia Transmit Intermittent Delta-Notch Signaling to Drive Pattern Refinement during Lateral Inhibition

(2010) Michael Cohen et al.   DEVELOPMENTAL CELL

Functional roles for noise in genetic circuits

(2010) Avigdor Eldar et al.   NATURE

Reaction-Diffusion Model as a Framework for Understanding Biological Pattern Formation

(2010) S. Kondo et al.   SCIENCE

Stochastic variation: From single cells to superorganisms

(2009) Maria L. Kilfoil et al.   HFSP Journal

BioNumbers—the database of key numbers in molecular and cell biology

(2009) Ron Milo et al.   NUCLEIC ACIDS RESEARCH

Pattern formation in the vertebrate neural tube: a sonic hedgehog morphogen-regulated transcriptional network

(2008) E. Dessaud et al.   DEVELOPMENT