Molecular Evolution of the Bactericidal/Permeability-Increasing Protein (BPIFA1) Regulating the Innate Immune Responses in Mammals

Positive Selection Drives the Adaptive Evolution of Mitochondrial Antiviral Signaling (MAVS) Proteins-Mediating Innate Immunity in Mammals

(2022) Hafiz Ishfaq Ahmad et al.   Frontiers in Veterinary Science

Intermolecular Interactions Drive Protein Adaptive and Coadaptive Evolution at Both Species and Population Levels

(2021) Junhui Peng et al.   MOLECULAR BIOLOGY AND EVOLUTION

Immunomodulatory function of the cystic fibrosis modifier gene BPIFA1

(2020) Aabida Saferali et al.   PLoS One

Integrated structural and evolutionary analysis reveals common mechanisms underlying adaptive evolution in mammals

(2020) Greg Slodkowicz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular biology of BPIFB1 and its advances in disease

(2020) Jie Li et al.   Annals of Translational Medicine

A bactericidal permeability-increasing protein (BPI) from manila clam Ruditapes philippinarum: Investigation on the antibacterial activities and antibacterial action mode

(2019) Dinglong Yang et al.   FISH & SHELLFISH IMMUNOLOGY

Positive selection drives the evolution of endocrine regulatory bone morphogenetic protein system in mammals

(2018) Hafiz Ishfaq Ahmad et al.   Oncotarget

The Role of BPIFA1 in Upper Airway Microbial Infections and Correlated Diseases

(2018) Yung-An Tsou et al.   Biomed Research International

Bioinformatics analysis of gene expression profile data to screen key genes involved in pulmonary sarcoidosis

(2017) Hongyan Li et al.   GENE

Adaptive molecular evolution of MC1R gene reveals the evidence for positive diversifying selection in indigenous goat populations

(2017) Hafiz Ishfaq Ahmad et al.   Ecology and Evolution

Maximum-likelihood approaches reveal signatures of positive selection in BMP15 and GDF9 genes modulating ovarian function in mammalian female fertility

(2017) Hafiz Ishfaq Ahmad et al.   Ecology and Evolution

Positive selection of IL-33 in adaptive immunity of domestic Chinese goats

(2017) Akhtar Rasool Asif et al.   Ecology and Evolution

Bactericidal/Permeability-Increasing Protein Fold–Containing Family Member A1 in Airway Host Protection and Respiratory Disease

(2015) Clemente J. Britto et al.   AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY

Cloning and characterization of two lipopolysaccharide-binding protein/bactericidal permeability–increasing protein (LBP/BPI) genes from the sea cucumber Apostichopus japonicus with diversified function in modulating ROS production

(2015) Yina Shao et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

Evolution of protein interactions: From interactomes to interfaces

(2014) Jessica Andreani et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Antimicrobial Activity of Peptides Derived from Olive Flounder Lipopolysaccharide Binding Protein/Bactericidal Permeability-Increasing Protein (LBP/BPI)

(2014) Bo-Hye Nam et al.   Marine Drugs

FUBAR: A Fast, Unconstrained Bayesian AppRoximation for Inferring Selection

(2013) B. Murrell et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Differential localisation of BPIFA1 (SPLUNC1) and BPIFB1 (LPLUNC1) in the nasal and oral cavities of mice

(2012) Maslinda Musa et al.   CELL AND TISSUE RESEARCH

Bactericidal/permeability increasing protein: A multifaceted protein with functions beyond LPS neutralization

(2012) Arjun Balakrishnan et al.   Innate Immunity

STRING v9.1: protein-protein interaction networks, with increased coverage and integration

(2012) Andrea Franceschini et al.   NUCLEIC ACIDS RESEARCH

Major role of positive selection in the evolution of conservative segments of Drosophila proteins

(2012) G. A. Bazykin et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The genomics of speciation-with-gene-flow

(2012) Jeffrey L. Feder et al.   TRENDS IN GENETICS

THE GENETIC ARCHITECTURE OF ADAPTATION UNDER MIGRATION-SELECTION BALANCE

(2011) Sam Yeaman et al.   EVOLUTION

Definitions and outcome measures for bullous pemphigoid: Recommendations by an international panel of experts

(2011) Dedee F. Murrell et al.   JOURNAL OF THE AMERICAN ACADEMY OF DERMATOLOGY

Adaptation of cells to new environments

(2011) Aaron N. Brooks et al.   Wiley Interdisciplinary Reviews-Systems Biology and Medicine

Statistical Properties of the Branch-Site Test of Positive Selection

(2010) Z. Yang et al.   MOLECULAR BIOLOGY AND EVOLUTION

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

(2009) P. Librado et al.   BIOINFORMATICS

Divergent selection and heterogeneous genomic divergence

(2009) PATRIK NOSIL et al.   MOLECULAR ECOLOGY

Protein structure prediction on the Web: a case study using the Phyre server

(2009) Lawrence A Kelley et al.   Nature Protocols

Physicochemical principles that regulate the competition between functional and dysfunctional association of proteins

(2009) S. Pechmann et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cloning and Expression Levels of Genes Relating to the Ovulation Rate of the Yunling Black Goat1

(2008) H.X. Cui et al.   BIOLOGY OF REPRODUCTION

Comparative Analysis of Testis Protein Evolution in Rodents

(2008) L. M. Turner et al.   GENETICS

Neutralism and selectionism: a network-based reconciliation

(2008) Andreas Wagner   NATURE REVIEWS GENETICS