Recurrent co-domestication of PIF/Harbinger transposable element proteins in insects

Recurrent evolution of vertebrate transcription factors by transposase capture

(2021) Rachel L. Cosby et al.   SCIENCE

Reference Transcriptome Data in Silkworm Bombyx mori

(2021) Kakeru Yokoi et al.   Insects

Structures of virus-like capsids formed by the Drosophila neuronal Arc proteins

(2020) Simon Erlendsson et al.   NATURE NEUROSCIENCE

The domesticated transposase ALP2 mediates formation of a novel Polycomb protein complex by direct interaction with MSI1, a core subunit of Polycomb Repressive Complex 2 (PRC2)

(2020) Christos N. Velanis et al.   PLoS Genetics

EasyCodeML: A visual tool for analysis of selection using CodeML

(2019) Fangluan Gao et al.   Ecology and Evolution

Host–transposon interactions: conflict, cooperation, and cooption

(2019) Rachel L Cosby et al.   GENES & DEVELOPMENT

CDD/SPARCLE: the conserved domain database in 2020

(2019) Shennan Lu et al.   NUCLEIC ACIDS RESEARCH

Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths

(2019) Akito Y. Kawahara et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A new species in the major malaria vector complex sheds light on reticulated species evolution

(2019) Maite G. Barrón et al.   Scientific Reports

Transposable Element Domestication As an Adaptation to Evolutionary Conflicts

(2017) Diwash Jangam et al.   TRENDS IN GENETICS

Ror2 signaling regulates Golgi structure and transport through IFT20 for tumor invasiveness

(2017) Michiru Nishita et al.   Scientific Reports

A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation

(2016) Cheng-Guo Duan et al.   CELL RESEARCH

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

(2016) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

(2016) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Phylogeny and Historical Biogeography of Asian Pterourus Butterflies (Lepidoptera: Papilionidae): A Case of Intercontinental Dispersal from North America to East Asia

(2015) Li-Wei Wu et al.   PLoS One

Kicking against the PRCs – A Domesticated Transposase Antagonises Silencing Mediated by Polycomb Group Proteins and Is an Accessory Component of Polycomb Repressive Complex 2

(2015) Shih Chieh Liang et al.   PLoS Genetics

Extensive introgression in a malaria vector species complex revealed by phylogenomics

(2014) M. C. Fontaine et al.   SCIENCE

Highly evolvable malaria vectors: The genomes of 16 Anopheles mosquitoes

(2014) D. E. Neafsey et al.   SCIENCE

ExPASy: SIB bioinformatics resource portal

(2012) P. Artimo et al.   NUCLEIC ACIDS RESEARCH

A comprehensive gene expression atlas of sex- and tissue-specificity in the malaria vector, Anopheles gambiae

(2011) Dean A Baker et al.   BMC GENOMICS

Repetitive Elements May Comprise Over Two-Thirds of the Human Genome

(2011) A. P. Jason de Koning et al.   PLoS Genetics

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Transposition of the Tourist-MITE mPing in yeast: an assay that retains key features of catalysis by the class 2 PIF/Harbinger superfamily

(2010) C Nathan Hancock et al.   Mobile DNA

Cellular Genes Derived from Gypsy/Ty3 Retrotransposons in Mammalian Genomes

(2009) Jean-Nicolas Volff   Annals of the New York Academy of Sciences

Molecular domestication of transposable elements: From detrimental parasites to useful host genes

(2009) L. Sinzelle et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

The B73 Maize Genome: Complexity, Diversity, and Dynamics

(2009) P. S. Schnable et al.   SCIENCE

Transposable elements as drivers of genomic and biological diversity in vertebrates

(2008) Astrid Böhne et al.   CHROMOSOME RESEARCH

Transposition of a reconstructed Harbinger element in human cells and functional homology with two transposon-derived cellular genes

(2008) L. Sinzelle et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA