From photon to signal in phytochromes: similarities and differences between prokaryotic and plant phytochromes

Lysine 206 inArabidopsisphytochrome A is the major site for ubiquitin-dependent protein degradation

(2015) Kaewta Rattanapisit et al.   JOURNAL OF BIOCHEMISTRY

Light-induced Changes in the Dimerization Interface of Bacteriophytochromes

(2015) Heikki Takala et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Red-Light-Dependent Interaction of phyB with SPA1 Promotes COP1–SPA1 Dissociation and Photomorphogenic Development in Arabidopsis

(2015) Xue-Dan Lu et al.   Molecular Plant

A protonation-coupled feedback mechanism controls the signalling process in bathy phytochromes

(2015) Francisco Velazquez Escobar et al.   Nature Chemistry

Light-Activated Phytochrome A and B Interact with Members of the SPA Family to Promote Photomorphogenesis in Arabidopsis by Reorganizing the COP1/SPA Complex

(2015) David J. Sheerin et al.   PLANT CELL

SUMOylation of phytochrome-B negatively regulates light-induced signaling inArabidopsis thaliana

(2015) Ari Sadanandom et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Light Signaling Mechanism of Two Tandem Bacteriophytochromes

(2015) Xiaojing Yang et al.   STRUCTURE

Red Light-Regulated Reversible Nuclear Localization of Proteins in Mammalian Cells and Zebrafish

(2015) Hannes M. Beyer et al.   ACS Synthetic Biology

Expression of recombinant full-length plant phytochromes assembled with phytochromobilin inPichia pastoris

(2014) Ah-Young Shin et al.   FEBS LETTERS

Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion

(2014) E. Sethe Burgie et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

FTIR Spectroscopy Revealing Light-Dependent Refolding of the Conserved Tongue Region of Bacteriophytochrome

(2014) Emina A. Stojković et al.   Journal of Physical Chemistry Letters

Crystallographic snapshot of the Escherichia coli EnvZ histidine kinase in an active conformation

(2014) Hedda U. Ferris et al.   JOURNAL OF STRUCTURAL BIOLOGY

Signal amplification and transduction in phytochrome photosensors

(2014) Heikki Takala et al.   NATURE

Molecular mechanisms for mediating light-dependent nucleo/cytoplasmic partitioning of phytochrome photoreceptors

(2014) Cornelia Klose et al.   NEW PHYTOLOGIST

Phytochromes: An Atomic Perspective on Photoactivation and Signaling

(2014) E. Sethe Burgie et al.   PLANT CELL

Crystal structure of the photosensing module from a red/far-red light-absorbing plant phytochrome

(2014) E. S. Burgie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Eukaryotic algal phytochromes span the visible spectrum

(2014) N. C. Rockwell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phytochrome Cytoplasmic Signaling

(2013) Jon Hughes   Annual Review of Plant Biology

Structure of the Biliverdin Cofactor in the Pfr State of Bathy and Prototypical Phytochromes

(2013) Johannes Salewski et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structure of the Cyanobacterial Phytochrome 2 Photosensor Implies a Tryptophan Switch for Phytochrome Signaling

(2013) Katrin Anders et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Helix Bundle Loops Determine Whether Histidine Kinases Autophosphorylate in cis or in trans

(2013) Orr Ashenberg et al.   JOURNAL OF MOLECULAR BIOLOGY

Full-Length Structure of a Sensor Histidine Kinase Pinpoints Coaxial Coiled Coils as Signal Transducers and Modulators

(2013) Ralph P. Diensthuber et al.   STRUCTURE

Mechanistic Insights Revealed by the Crystal Structure of a Histidine Kinase with Signal Transducer and Sensor Domains

(2013) Chen Wang et al.   PLOS BIOLOGY

Interaction with plant transcription factors can mediate nuclear import of phytochrome B

(2012) A. Pfeiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of a Bacteriophytochrome and Light-Stimulated Protomer Swapping with a Gene Repressor

(2012) Dom Bellini et al.   STRUCTURE

Spectroscopy and a High-Resolution Crystal Structure of Tyr263 Mutants of Cyanobacterial Phytochrome Cph1

(2011) Jo Mailliet et al.   JOURNAL OF MOLECULAR BIOLOGY

Temperature-scan cryocrystallography reveals reaction intermediates in bacteriophytochrome

(2011) Xiaojing Yang et al.   NATURE

An infrared fluorescent protein for deeper imaging

(2011) Jérôme Lecoq et al.   NATURE BIOTECHNOLOGY

A Non-Covalently Attached Chromophore can Mediate Phytochrome B Signaling in Arabidopsis

(2011) Y. Oka et al.   PLANT AND CELL PHYSIOLOGY

Two ground state isoforms and a chromophore D-ring photoflip triggering extensive intramolecular changes in a canonical phytochrome

(2011) C. Song et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Phytochrome three-dimensional structures and functions

(2010) Jon Hughes   BIOCHEMICAL SOCIETY TRANSACTIONS

Light-Induced Conformational Changes of the Chromophore and the Protein in Phytochromes: Bacterial Phytochromes as Model Systems

(2010) Patrick Scheerer et al.   CHEMPHYSCHEM

Interaction fidelity in two-component signaling

(2010) Hendrik Szurmant et al.   CURRENT OPINION IN MICROBIOLOGY

Phytochrome: structural basis for its functions

(2010) Akira Nagatani   CURRENT OPINION IN PLANT BIOLOGY

Spectroscopic and Photochemical Characterization of the Red-Light Sensitive Photosensory Module of Cph2 from Synechocystis PCC 6803

(2010) Katrin Anders et al.   PHOTOCHEMISTRY AND PHOTOBIOLOGY

Quaternary organization of a phytochrome dimer as revealed by cryoelectron microscopy

(2010) H. Li et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Polarity Probe for Monitoring Light-induced Structural Changes at the Entrance of the Chromophore Pocket in a Bacterial Phytochrome

(2009) Berthold Borucki et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Conformational differences between the Pfr and Pr states in Pseudomonas aeruginosa bacteriophytochrome

(2009) X. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Distinct classes of red/far-red photochemistry within the phytochrome superfamily

(2009) N. C. Rockwell et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Structure of PAS-Linked Histidine Kinase and the Response Regulator Complex

(2009) Seiji Yamada et al.   STRUCTURE

Residues Clustered in the Light-Sensing Knot of Phytochrome B are Necessary for Conformer-Specific Binding to Signaling Partner PIF3

(2009) Elise A. Kikis et al.   PLoS Genetics

Chromophore Heterogeneity and Photoconversion in Phytochrome Crystals and Solution Studied by Resonance Raman Spectroscopy

(2008) David von Stetten et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Decoding of Light Signals by Plant Phytochromes and Their Interacting Proteins

(2008) Gabyong Bae et al.   Annual Review of Plant Biology

Characterization of Two Thermostable Cyanobacterial Phytochromes Reveals Global Movements in the Chromophore-binding Domain during Photoconversion

(2008) Andrew T. Ulijasz et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mutational Analysis ofDeinococcus radioduransBacteriophytochrome Reveals Key Amino Acids Necessary for the Photochromicity and Proton Exchange Cycle of Phytochromes

(2008) Jeremiah R. Wagner et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Design and Signaling Mechanism of Light-Regulated Histidine Kinases

(2008) Andreas Möglich et al.   JOURNAL OF MOLECULAR BIOLOGY

Cyanobacteriochromes: a new superfamily of tetrapyrrole-binding photoreceptors in cyanobacteria

(2008) Masahiko Ikeuchi et al.   PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES

The structure of a complete phytochrome sensory module in the Pr ground state

(2008) L.-O. Essen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Crystal structure of Pseudomonas aeruginosa bacteriophytochrome: Photoconversion and signal transduction

(2008) X. Yang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mutant Screen Distinguishes between Residues Necessary for Light-Signal Perception and Signal Transfer by Phytochrome B

(2008) Yoshito Oka et al.   PLoS Genetics