The evolution of silicon transporters in diatoms

A role for diatom-like silicon transporters in calcifying coccolithophores

(2016) Grażyna M. Durak et al.   Nature Communications

Metatranscriptome analyses indicate resource partitioning between diatoms in the field

(2015) Harriet Alexander et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

InterProScan 5: genome-scale protein function classification

(2014) P. Jones et al.   BIOINFORMATICS

Evidence for a Regulatory Role of Diatom Silicon Transporters in Cellular Silicon Responses

(2014) Roshan P. Shrestha et al.   EUKARYOTIC CELL

The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing

(2014) Patrick J. Keeling et al.   PLOS BIOLOGY

A family of diatom-like silicon transporters in the siliceous loricate choanoflagellates

(2013) A. O. Marron et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Expression, Purification, and Reconstitution of a Diatom Silicon Transporter

(2012) Paul Curnow et al.   BIOCHEMISTRY

The Revised Classification of Eukaryotes

(2012) Sina M. Adl et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Frustule-related gene transcription and the influence of diatom community composition on silica precipitation in an iron-limited environment

(2012) Colleen A. Durkin et al.   LIMNOLOGY AND OCEANOGRAPHY

Significant silicon accumulation by marine picocyanobacteria

(2012) Stephen B. Baines et al.   Nature Geoscience

Untangling Genomes from Metagenomes: Revealing an Uncultured Class of Marine Euryarchaeota

(2012) V. Iverson et al.   SCIENCE

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree

(2010) Frederick A Matsen et al.   BMC BIOINFORMATICS

ETE: a python Environment for Tree Exploration

(2010) Jaime Huerta-Cepas et al.   BMC BIOINFORMATICS

A Cover of Glass: First Report of Biomineralized Silicon in a Ciliate,Maryna umbrellata(Ciliophora: Colpodea)

(2009) WILHELM FOISSNER et al.   JOURNAL OF EUKARYOTIC MICROBIOLOGY

Genome-Wide Transcriptome Analyses of Silicon Metabolism in Phaeodactylum tricornutum Reveal the Multilevel Regulation of Silicic Acid Transporters

(2009) Guillaume Sapriel et al.   PLoS One

Diatoms, Biomineralization Processes, and Genomics

(2008) Mark Hildebrand   CHEMICAL REVIEWS

Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses

(2008) T. Mock et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Silicon Uptake in Diatoms Revisited: A Model for Saturable and Nonsaturable Uptake Kinetics and the Role of Silicon Transporters

(2007) K. Thamatrakoln et al.   PLANT PHYSIOLOGY