Article
Mathematics, Interdisciplinary Applications
M. Tenorio, E. Rangel, J. Menezes
Summary: Adaptive movement does not necessarily provide an advantage in cyclic spatial games, as it can delay spatial domain occupation and increase vulnerability to dominant species. The impact of adaptive movement behavior depends on whether individuals have a long-range neighborhood perception.
CHAOS SOLITONS & FRACTALS
(2022)
Article
Mathematics, Interdisciplinary Applications
J. Menezes, R. Barbalho
Summary: This study investigates the importance of weak species in the cyclic spatial game and finds that the spatial organization and positions of weak species in the game order determine the stability of the cyclic game. The results show that the further apart the regions inhabited by different weak species are, the less likely the species will coexist.
CHAOS SOLITONS & FRACTALS
(2023)
Article
Biology
J. Menezes, S. Batista, E. Rangel
Summary: We studied a cyclic game system with three species in which organisms face a contagious disease that can change its virulence through pathogen mutation. By restricting mobility as a defense strategy, organisms can reduce disease dissemination. Stochastic simulations of the spatial version of the rock-paper-scissors game were performed to investigate the impact of this collective self-preservation strategy on disease infection risk. The outcomes showed that mobility control induces plasticity in spatial patterns, allowing ecosystems to adapt and minimize disease contamination risk. The findings suggest that the benefits of mobility restriction depend on the type of pathogen mutation.
Article
Biology
J. Menezes, E. Rangel
Summary: We conducted stochastic simulations of the spatial rock-paper-scissors game, taking into account the use of sensory abilities by individuals to detect enemies. Our findings indicate that locally adaptive aggregation is beneficial when opponents' density is below 30%, but may increase the average death risk at higher opponent densities. Furthermore, we show that organisms with greater sensing abilities can maximize the effects of locally adaptive aggregation on death risk. The promotion of biodiversity through locally adaptive aggregation behavior is independent of organism mobility and holds true for complex systems with multiple species.
Article
Ecology
J. Menezes, E. Rangel, B. Moura
Summary: We studied a nonhierarchical tritrophic system using the rock-paper scissors game rules to describe the predator-prey interactions. Our stochastic simulations showed that individuals can strategically move towards areas with more of their own kind to form clusters. We introduced a maximum perception distance and a minimum conditioning level to investigate the effect of physical and cognitive abilities on this gregarious behavior. The results revealed that the defense strategy significantly reduces predation risk and is more profitable when individuals can perceive further distances, leading to the formation of larger groups. The dominance in the cyclic spatial game is observed in species with more conditioned organisms, while species with fewer individuals ready to perform aggregation strategy give their predators the opportunity to occupy a larger fraction of the territory. The spatial interactions studied in our numerical experiments provide valuable insights for biologists and data scientists to understand how local interactions influence ecosystem dynamics.
ECOLOGICAL INFORMATICS
(2022)
Article
Mathematics, Interdisciplinary Applications
Mohd Hafiz Mohd, Junpyo Park
Summary: The study shows that asymmetrical rock-paper-scissors competition in heterogeneous environments can produce richer dynamical behaviors, contributing to the understanding of species biodiversity in ecosystems. Unlike homogeneous environments, additional dynamics such as species coexistence and single-species persistence states can emerge in heterogeneous environments.
CHAOS SOLITONS & FRACTALS
(2021)
Review
Biochemistry & Molecular Biology
Sarah M. Assmann, Hong-Li Chou, Philip C. Bevilacqua
Summary: RNA can adopt a wide range of structures through self-folding, ranging from simple hairpins to complex 3D structures, and can interact with metabolites and macromolecules for regulatory purposes. Recent years have seen the elucidation of various RNA structures, including tRNAs, ribozymes, riboswitches, ribosomes, splicesomes, and the complete RNA structuromes. These advances have deepened our understanding of fundamental biological processes and their structure-dependent responses to environmental signals.
Article
Mathematics, Interdisciplinary Applications
J. Menezes, M. Tenorio
Summary: Climate changes can destabilize relationships among species in ecosystems. The research investigates spatial models with unevenness that weakens the selection capacity of one species. The results demonstrate that the weak species dominates the local ecosystem, and the prevalence of weak species is more significant with a smooth transition in selection capacity.
JOURNAL OF PHYSICS-COMPLEXITY
(2023)
Article
Physics, Multidisciplinary
Hong-Yi Ma, Cong Liu, Zhi-Xi Wu, Jian-Yue Guan
Summary: A balance in nature is maintained through the coexistence of multiple species via interspecific competition. The evolutionary dynamics of cyclic interactions in nature involve different biological behaviors. The stability of ecosystems is influenced by the external environment, which affects the biological behavior. In this study, we investigated how periodic changes in the external environment affect interspecific competition and its evolutionary dynamics.
Article
Physics, Fluids & Plasmas
J. Menezes
Summary: Animals react collectively to escape predation risk and decrease predation probability in the predator's neighborhood through antipredator behavior, leading to the emergence of spiral patterns. The study suggests that antipredator behavior can jeopardize biodiversity for highly mobile species.
Article
Chemistry, Multidisciplinary
Takahiro Komai, Hiroaki Kurokawa, Song-Ju Kim
Summary: This study examined the human capacity to generate randomness in decision-making processes using the rock-paper-scissors game. The results showed clear differences in randomness among pseudorandom number series, human-generated series, and AI-generated series, based on the complexity and determinism evaluation of the time series data.
APPLIED SCIENCES-BASEL
(2022)
Article
Physics, Fluids & Plasmas
P. P. Avelino, B. F. de Oliveira, R. S. Trintin
Summary: Researchers made a simple modification to the standard spatial stochastic RPS model, allowing the Lotka-Volterra and May-Leonard models to produce similar results, and this adjustment naturally leads to the emergence of spiral patterns in both its three- and four-state formulations.
Article
Physics, Fluids & Plasmas
J. Menezes, B. Moura
Summary: The study reveals that the antipredator response may lead to spiral patterns with the segregation of organisms of the same species occupying different spatial domains. A less localized antipredator response increases the average size of single-species patches, improving individual protection against predation. Despite the increased predation risk with a more localized antipredator response, high mobility constraints benefit species coexistence.
Article
Physics, Multidisciplinary
P. P. Avelino, B. F. de Oliveira, R. S. Trintin
Summary: In this study, a parameter generalization of the standard Rock-Paper-Scissors (RPS) model is proposed, allowing for predator-prey reversal. The dynamics of the kappa RPS model are investigated using lattice-based spatial stochastic simulations, showing the formation of spiral patterns and the influence of predator-prey reversal on coexistence. The results are interpreted by considering the dynamics of circular domains.
Article
Mathematics, Interdisciplinary Applications
P. P. Avelino, B. F. De Oliveira, R. S. Trintin
Summary: This study investigates the impact of parity on the abundance of weak species. Through modeling and simulation experiments, it is found that parity has a significant effect on the performance of weak species, especially when the total number of species is less than or equal to 8, with odd numbers of species being more favorable to weak species.
CHAOS SOLITONS & FRACTALS
(2022)
Article
Ecology
Colby J. Clark
Summary: Historically, the idea that ecosystems have geographical boundaries has been considered naive and impractical. However, advancements in remote sensing have allowed us to reliably detect spatial patterns and provide early warnings of potential critical transitions. This invites a reexamination of the role geographical boundaries play in explaining the concept of resilience, leading to a better understanding of the causal dynamics that lead to emergent self-organization.
ECOLOGICAL COMPLEXITY
(2024)