Isolation and Characterization of Bacteria from Natural Hot Spring and Insights into the Thermophilic Cellulase Production

A novel thermostable cellulase-producing Bacillus licheniformis A5 acts synergistically with Bacillus subtilis B2 to improve degradation of Chinese distillers’ grains

(2021) Gang Yang et al.   BIORESOURCE TECHNOLOGY

TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes

(2021) Jan P Meier-Kolthoff et al.   NUCLEIC ACIDS RESEARCH

Residual sugarcane bagasse conversion in India: current status, technologies, and policies

(2020) Shireen Quereshi et al.   Biomass Conversion and Biorefinery

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

(2019) Kai Blin et al.   NUCLEIC ACIDS RESEARCH

OrthoVenn2: a web server for whole-genome comparison and annotation of orthologous clusters across multiple species

(2019) Ling Xu et al.   NUCLEIC ACIDS RESEARCH

TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy

(2019) Jan P. Meier-Kolthoff et al.   Nature Communications

ABySS 2.0: resource-efficient assembly of large genomes using a Bloom filter

(2017) Shaun D. Jackman et al.   GENOME RESEARCH

Overproduction of cellulase by Trichoderma reesei RUT C30 through batch-feeding of synthesized low-cost sugar mixture

(2016) Yonghao Li et al.   BIORESOURCE TECHNOLOGY

BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences

(2016) Minoru Kanehisa et al.   JOURNAL OF MOLECULAR BIOLOGY

NCBI prokaryotic genome annotation pipeline

(2016) Tatiana Tatusova et al.   NUCLEIC ACIDS RESEARCH

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

(2015) Felipe A. Simão et al.   BIOINFORMATICS

FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program: Table 1.

(2015) Vincent Lefort et al.   MOLECULAR BIOLOGY AND EVOLUTION

Estimation method for serial dilution experiments

(2014) Avishai Ben-David et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Informed and automated k-mer size selection for genome assembly

(2013) R. Chikhi et al.   BIOINFORMATICS

Genome sequence-based species delimitation with confidence intervals and improved distance functions

(2013) Jan P Meier-Kolthoff et al.   BMC BIOINFORMATICS

Thermostable, haloalkaline cellulase from Bacillus halodurans CAS 1 by conversion of lignocellulosic wastes

(2013) Neelamegam Annamalai et al.   CARBOHYDRATE POLYMERS

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

Production, purification and characterization of a novel thermotolerant endoglucanase (CMCase) from Bacillus strain isolated from cow dung

(2013) Sangrila Sadhu et al.   SpringerPlus

In-depth investigation of enzymatic hydrolysis of biomass wastes based on three major components: Cellulose, hemicellulose and lignin

(2010) Lili Lin et al.   BIORESOURCE TECHNOLOGY

Industrial scale of optimization for the production of carboxymethylcellulase from rice bran by a marine bacterium, Bacillus subtilis subsp. subtilis A-53

(2009) Bo-Hwa Lee et al.   ENZYME AND MICROBIAL TECHNOLOGY

Pilot-scale production of carboxymethylcellulase from rice hull by Bacillus amyloliquefaciens DL-3

(2008) Kang-Ik Jo et al.   BIOTECHNOLOGY AND BIOPROCESS ENGINEERING

The CGView Server: a comparative genomics tool for circular genomes

(2008) J. R. Grant et al.   NUCLEIC ACIDS RESEARCH

Purification and characterization of cellulase produced by Bacillus amyoliquefaciens DL-3 utilizing rice hull

(2007) You-Jung Lee et al.   BIORESOURCE TECHNOLOGY