Rewiring of hormones and light response pathways underlies the inhibition of stomatal development in an amphibious plant Rorippa aquatica underwater

Phytohormones and their crosstalk in regulating stomatal development and patterning

(2021) Hongbin Wei et al.   JOURNAL OF EXPERIMENTAL BOTANY

Population differentiation in the leaf shape and growth form of Cardamine scutata Thunb. in tidal and non‐tidal habitats

(2021) Eri Soga et al.   PLANT SPECIES BIOLOGY

The diversity of stomatal development regulation inCallitricheis related to the intrageneric diversity in lifestyles

(2021) Yuki Doll et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arabidopsis stomatal polarity protein BASL mediates distinct processes before and after cell division to coordinate cell size and fate asymmetries

(2021) Yan Gong et al.   DEVELOPMENT

Dimorphic Leaf Development of the Aquatic Plant Callitriche palustris L. Through Differential Cell Division and Expansion

(2020) Hiroyuki Koga et al.   Frontiers in Plant Science

Photosynthetic acclimation of terrestrial and submerged leaves in the amphibious plant Hygrophila difformis

(2019) Genki Horiguchi et al.   AoB Plants

Heterophylly: Phenotypic Plasticity of Leaf Shape in Aquatic and Amphibious Plants

(2019) Gaojie Li et al.   Plants-Basel

Hormonal and environmental signals guiding stomatal development

(2018) Xingyun Qi et al.   BMC BIOLOGY

Direct Control of SPEECHLESS by PIF4 in the High-Temperature Response of Stomatal Development

(2018) On Sun Lau et al.   CURRENT BIOLOGY

MUTE Directly Orchestrates Cell-State Switch and the Single Symmetric Division to Create Stomata

(2018) Soon-Ki Han et al.   DEVELOPMENTAL CELL

Jasmonate Negatively Regulates Stomatal Development in Arabidopsis Cotyledons

(2018) Xiao Han et al.   PLANT PHYSIOLOGY

The Pivotal Role of Ethylene in Plant Growth

(2018) Marieke Dubois et al.   TRENDS IN PLANT SCIENCE

Comparative transcriptomics with self-organizing map reveals cryptic photosynthetic differences between two accessions of North American Lake cress

(2018) Hokuto Nakayama et al.   Scientific Reports

A molecular basis behind heterophylly in an amphibious plant, Ranunculus trichophyllus

(2018) Juhyun Kim et al.   PLoS Genetics

Preface to the Special Issue: Brief review of plant hormones and their utilization in agriculture

(2018) Tadao Asami et al.   JOURNAL OF PESTICIDE SCIENCE

Water-Wisteria as an ideal plant to study heterophylly in higher aquatic plants

(2017) Gaojie Li et al.   PLANT CELL REPORTS

Plant responses to flooding stress

(2016) Elena Loreti et al.   CURRENT OPINION IN PLANT BIOLOGY

Lineage-specific stem cells, signals and asymmetries during stomatal development

(2016) Soon-Ki Han et al.   DEVELOPMENT

The Red Light Receptor Phytochrome B Directly Enhances Substrate-E3 Ligase Interactions to Attenuate Ethylene Responses

(2016) Hui Shi et al.   DEVELOPMENTAL CELL

Loss of heterophylly in aquatic plants: not ABA-mediated stress but exogenous ABA treatment induces stomatal leaves in Potamogeton perfoliatus

(2016) Satoko Iida et al.   JOURNAL OF PLANT RESEARCH

The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

(2016) Jeanine L. Olsen et al.   NATURE

Beyond the thale: comparative genomics and genetics of Arabidopsis relatives

(2015) Daniel Koenig et al.   NATURE REVIEWS GENETICS

Flood adaptive traits and processes: an overview

(2015) Laurentius A. C. J. Voesenek et al.   NEW PHYTOLOGIST

Ethylene-Mediated Acclimations to Flooding Stress

(2015) Rashmi Sasidharan et al.   PLANT PHYSIOLOGY

Phylogenetic tree of vascular plants reveals the origins of aquatic angiosperms

(2015) Zhi-Yuan Du et al.   Journal of Systematics and Evolution

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Regulation of the KNOX-GA Gene Module Induces Heterophyllic Alteration in North American Lake Cress

(2014) Hokuto Nakayama et al.   PLANT CELL

Direct roles of SPEECHLESS in the specification of stomatal self-renewing cells

(2014) O. S. Lau et al.   SCIENCE

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Underwater Photosynthesis of Submerged Plants – Recent Advances and Methods

(2013) Ole Pedersen et al.   Frontiers in Plant Science

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

Wait or escape? Contrasting submergence tolerance strategies of Rorippa amphibia, Rorippa sylvestris and their hybrid

(2012) Melis Akman et al.   ANNALS OF BOTANY

Ethylene Receptor 1 (ETR1) Is Sufficient and Has the Predominant Role in Mediating Inhibition of Ethylene Responses by Silver inArabidopsis thaliana

(2012) Brittany K. McDaniel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

(2012) Davis J. McCarthy et al.   NUCLEIC ACIDS RESEARCH

Effects of light quality on leaf morphogenesis of a heterophyllous amphibious plant, Rotala hippuris

(2011) Naoko Momokawa et al.   ANNALS OF BOTANY

Expression of rice SUB1A and SUB1C transcription factors in Arabidopsis uncovers flowering inhibition as a submergence tolerance mechanism

(2011) Julián M. Peña-Castro et al.   PLANT JOURNAL

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

phytochrome B and PIF4 Regulate Stomatal Development in Response to Light Quantity

(2009) Stuart A. Casson et al.   CURRENT BIOLOGY

Stomagen positively regulates stomatal density in Arabidopsis

(2009) Shigeo S. Sugano et al.   NATURE

The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water

(2009) Yoko Hattori et al.   NATURE

Stomatal Density is Controlled by a Mesophyll-Derived Signaling Molecule

(2009) Tatsuhiko Kondo et al.   PLANT AND CELL PHYSIOLOGY

Cryptochromes, Phytochromes, and COP1 Regulate Light-Controlled Stomatal Development in Arabidopsis

(2009) C.-Y. Kang et al.   PLANT CELL

High-throughput functional annotation and data mining with the Blast2GO suite

(2008) S. Gotz et al.   NUCLEIC ACIDS RESEARCH

Ethylene—A key regulator of submergence responses in rice

(2007) Takeshi Fukao et al.   PLANT SCIENCE