4.4 Article

Predicting water-to-cyclohexane partitioning of the SAMPL5 molecules using dielectric balancing of force fields

期刊

JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN
卷 30, 期 11, 页码 1059-1065

出版社

SPRINGER
DOI: 10.1007/s10822-016-9950-z

关键词

SAMPL; Force field; Solvation free energy; Dielectric constant; Distribution coefficient

资金

  1. National Institutes of Health [GM063592]
  2. Oklahoma State University
  3. National Science Foundation [OCI1126330]

向作者/读者索取更多资源

Alchemical transformation of solutes using classical fixed-charge force fields is a popular strategy for assessing the free energy of transfer in different environments. Accurate estimations of transfer between phases with significantly different polarities can be difficult because of the static nature of the force fields. Here, we report on an application of such calculations in the SAMPL5 experiment that also involves an effort in balancing solute and solvent interactions via their expected static dielectric constants. This strategy performs well with respect to predictive accuracy and correlation with unknown experimental values. We follow this by performing a series of retrospective investigations which highlight the potential importance of proper balancing in these systems, and we use a null hypothesis analysis to explore potential biases in the comparisons with experiment. The collective findings indicate that considerations of force field compatibility through dielectric behavior is a potential strategy for future improvements in transfer processes between disparate environments.

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