Genomic and Transcriptomic Analyses of Prime Editing Guide RNA–Independent Off-Target Effects by Prime Editors
出版年份 2022 全文链接
标题
Genomic and Transcriptomic Analyses of Prime Editing Guide RNA–Independent Off-Target Effects by Prime Editors
作者
关键词
-
出版物
CRISPR Journal
Volume 5, Issue 2, Pages 276-293
出版商
Mary Ann Liebert Inc
发表日期
2022-03-17
DOI
10.1089/crispr.2021.0080
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Genome-wide specificity of prime editors in plants
- (2021) Shuai Jin et al. NATURE BIOTECHNOLOGY
- Eliminating base-editor-induced genome-wide and transcriptome-wide off-target mutations
- (2021) Lijie Wang et al. NATURE CELL BIOLOGY
- Prime genome editing in rice and wheat
- (2020) Qiupeng Lin et al. NATURE BIOTECHNOLOGY
- A rationally engineered cytosine base editor retains high on-target activity while reducing both DNA and RNA off-target effects
- (2020) Erwei Zuo et al. NATURE METHODS
- Rationally Designed APOBEC3B Cytosine Base Editors with Improved Specificity
- (2020) Shuai Jin et al. MOLECULAR CELL
- Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors
- (2020) Andrew V. Anzalone et al. NATURE BIOTECHNOLOGY
- A Tale of Two Moieties: Rapidly Evolving CRISPR/Cas-Based Genome Editing
- (2020) Li Yang et al. TRENDS IN BIOCHEMICAL SCIENCES
- Cas12a Base Editors Induce Efficient and Specific Editing with Low DNA Damage Response
- (2020) Xiao Wang et al. Cell Reports
- Unbiased investigation of specificities of prime editing systems in human cells
- (2020) Do Yon Kim et al. NUCLEIC ACIDS RESEARCH
- Cytosine base editor generates substantial off-target single-nucleotide variants in mouse embryos
- (2019) Erwei Zuo et al. SCIENCE
- Cytosine, but not adenine, base editors induce genome-wide off-target mutations in rice
- (2019) Shuai Jin et al. SCIENCE
- Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors
- (2019) Julian Grünewald et al. NATURE
- To BE or not to BE, that is the question
- (2019) Jia Chen et al. NATURE BIOTECHNOLOGY
- Off-target RNA mutation induced by DNA base editing and its elimination by mutagenesis
- (2019) Changyang Zhou et al. NATURE
- Search-and-replace genome editing without double-strand breaks or donor DNA
- (2019) Andrew V. Anzalone et al. NATURE
- Targeting specificity of APOBEC-based cytosine base editor in human iPSCs determined by whole genome sequencing
- (2019) Erica McGrath et al. Nature Communications
- One Prime for All Editing
- (2019) Li Yang et al. CELL
- Base editing with a Cpf1–cytidine deaminase fusion
- (2018) Xiaosa Li et al. NATURE BIOTECHNOLOGY
- Strelka2: fast and accurate calling of germline and somatic variants
- (2018) Sangtae Kim et al. NATURE METHODS
- Efficient base editing in methylated regions with a human APOBEC3A-Cas9 fusion
- (2018) Xiao Wang et al. NATURE BIOTECHNOLOGY
- CIRCLE-seq: a highly sensitive in vitro screen for genome-wide CRISPR–Cas9 nuclease off-targets
- (2017) Shengdar Q Tsai et al. NATURE METHODS
- APOBEC3 induces mutations during repair of CRISPR–Cas9-generated DNA breaks
- (2017) Liqun Lei et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- APOBEC3 induces mutations during repair of CRISPR–Cas9-generated DNA breaks
- (2017) Liqun Lei et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Digenome-seq: genome-wide profiling of CRISPR-Cas9 off-target effects in human cells
- (2015) Daesik Kim et al. NATURE METHODS
- Computel: Computation of Mean Telomere Length from Whole-Genome Next-Generation Sequencing Data
- (2015) Lilit Nersisyan et al. PLoS One
- Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases
- (2014) S. Bae et al. BIOINFORMATICS
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- GUIDE-seq enables genome-wide profiling of off-target cleavage by CRISPR-Cas nucleases
- (2014) Shengdar Q Tsai et al. NATURE BIOTECHNOLOGY
- Accurate de novo and transmitted indel detection in exome-capture data using microassembly
- (2014) Giuseppe Narzisi et al. NATURE METHODS
- Estimating telomere length from whole genome sequence data
- (2014) Zhihao Ding et al. NUCLEIC ACIDS RESEARCH
- rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data
- (2014) Shihao Shen et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets
- (2012) Andreas Wilm et al. NUCLEIC ACIDS RESEARCH
- The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
- (2010) A. McKenna et al. GENOME RESEARCH
Publish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn MoreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now